Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC096656.1-201ENST00000623826 1364 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC133552.1-201ENST00000569988 4007 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC011477.1-204ENST00000623416 1325 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 RNA5SP319-201ENST00000362768 119 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 RNU6-1300P-201ENST00000391046 108 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AL450992.3-201ENST00000413192 568 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC004022.2-201ENST00000413824 193 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AL049610.1-201ENST00000423374 372 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 DYNLL1P7-201ENST00000429273 258 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 PRELID3BP10-201ENST00000431957 584 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AL050321.1-201ENST00000432363 400 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AL161722.2-201ENST00000434731 981 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 GSTM5P1-201ENST00000434751 660 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AL137845.2-201ENST00000444292 988 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AL034418.1-201ENST00000448675 860 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 USP9YP10-201ENST00000454868 628 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 RN7SL51P-201ENST00000468230 285 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 OR2AO1P-201ENST00000476497 403 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 RPL7P41-201ENST00000485823 957 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 RPS27P23-201ENST00000487608 251 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 USP9YP5-201ENST00000511770 630 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 EIF4A2P5-201ENST00000529914 499 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 ROCK1P1-201ENST00000573767 549 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC011840.5-201ENST00000582125 771 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC008759.1-201ENST00000589783 983 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 U73023.1-201ENST00000603134 700 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC009597.2-201ENST00000604659 592 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC211433.2-201ENST00000608433 387 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC007204.2-201ENST00000615022 616 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 MIR8069-1-201ENST00000616627 86 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC006338.2-201ENST00000616864 791 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 AC099842.1-201ENST00000619919 596 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 MIR8069-2-201ENST00000621412 86 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 MIR6719-201ENST00000622428 87 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 SAMMSON-209ENST00000641222 1100 ntBASIC4.76□□□□□ -1.65
SNX18Q96RF0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX18Q96RF0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
SNX18Q96RF0 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 Y_RNA.311-201ENST00000365068 96 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 RNU2-6P-201ENST00000411404 190 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 TPT1P2-201ENST00000413105 503 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 OR5BE1P-201ENST00000425977 939 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC007559.1-201ENST00000428736 355 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 MTCO1P19-201ENST00000443487 500 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms