Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SEC11B-201ENST00000518383 499 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 IGKV1-32-201ENST00000519290 311 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 SOX5P1-201ENST00000524155 1127 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 EDDM3DP-201ENST00000554692 434 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC022404.1-201ENST00000555320 273 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 TGIF1P1-201ENST00000558095 802 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC010653.1-201ENST00000571108 881 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 MTCO3P24-201ENST00000572729 782 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 YWHAQP7-201ENST00000603536 658 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC006023.2-201ENST00000609916 167 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AL096712.1-201ENST00000614561 159 ntBASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTSSBQ8NFR3 AC073055.1-201ENST00000456901 1621 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 DHX40P1-201ENST00000588725 1412 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL353743.4-201ENST00000422653 1547 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 RNU1-75P-201ENST00000347264 129 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL354719.1-201ENST00000406535 843 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 RPL7AP73-201ENST00000413490 353 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC245291.1-201ENST00000419501 328 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC066692.1-201ENST00000421721 457 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC012075.1-201ENST00000436549 580 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 RPL34P20-201ENST00000442771 351 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 SPRYD7P1-201ENST00000443861 570 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 ARL5AP2-201ENST00000444698 533 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC093392.2-201ENST00000450682 337 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 RPL23AP81-201ENST00000455252 467 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 RPS20P4-201ENST00000461659 355 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 RPL35AP15-201ENST00000468042 339 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 HMGN2P13-201ENST00000476476 274 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 HMGB3P14-201ENST00000494195 599 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 RN7SL466P-201ENST00000497546 295 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 KCTD9P5-201ENST00000504141 1170 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 GAPDHP56-201ENST00000506031 988 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC004825.1-201ENST00000555068 586 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL157394.1-201ENST00000562983 1224 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC012417.1-201ENST00000582307 1039 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC084373.1-201ENST00000603311 235 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 MEMO1P5-201ENST00000604810 406 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL512413.1-201ENST00000606489 382 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC064801.1-201ENST00000612025 407 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AC091905.1-201ENST00000624400 311 ntBASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
SPTSSBQ8NFR3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.09□□□□□ -2.08
SPTSSBQ8NFR3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
SPTSSBQ8NFR3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SPTSSBQ8NFR3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SPTSSBQ8NFR3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.08□□□□□ -2.08
SPTSSBQ8NFR3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SPTSSBQ8NFR3 AC011978.2-201ENST00000569835 2054 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms