Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 RN7SL432P-201ENST00000484057 298 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 RNU2-27P-201ENST00000516185 142 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 U4.6-201ENST00000621618 127 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 SNORA48.8-201ENST00000391324 134 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 NANOGNBP1-201ENST00000448444 480 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 TPT1P1-201ENST00000458495 518 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC069240.1-201ENST00000548774 375 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AL451007.1-201ENST00000595491 289 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC093732.2-201ENST00000607950 274 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AL157762.1-201ENST00000619612 415 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 MIR1271-201ENST00000408537 86 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 DBIP2-201ENST00000419076 262 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 MORF4L2P1-201ENST00000503761 858 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC008759.1-201ENST00000589783 983 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 MIR7702-201ENST00000621931 59 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC026422.1-201ENST00000623961 452 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 HSPD1P11-201ENST00000508643 1702 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 RNU4-82P-201ENST00000362443 140 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 RPL23AP89-201ENST00000439324 255 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 PTGES3P3-201ENST00000511479 482 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 AC100770.1-201ENST00000532310 322 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 NRBF2P5-201ENST00000603087 788 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 AL392088.2-201ENST00000637607 285 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 RN7SKP53-201ENST00000411337 315 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 COTL1P1-201ENST00000422309 375 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 AC010095.1-201ENST00000443543 144 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 AC107993.1-201ENST00000591343 684 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 AL390838.2-201ENST00000602394 274 ntBASIC2.49□□□□□ -2.01
CSMD3Q7Z407 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC2.49□□□□□ -2.01
CSMD3Q7Z407 OR56A5-201ENST00000340110 738 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 MIR195-201ENST00000385194 87 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 VDAC2P1-201ENST00000399358 958 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 MTHFD2P2-201ENST00000407725 247 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 RPL23AP25-201ENST00000430973 463 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AL591473.1-201ENST00000464297 313 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 RPL32P34-201ENST00000486380 400 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC139783.2-201ENST00000504847 1145 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC006539.2-201ENST00000601729 572 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 SNORA62.6-201ENST00000606322 83 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AL732618.1-201ENST00000623251 301 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AP000553.6-201ENST00000641242 118 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms