Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.18□□□□□ -1.58
CLTCL1P53675 AC139426.3-201ENST00000605648 2059 ntBASIC5.18□□□□□ -1.58
CLTCL1P53675 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLTCL1P53675 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLTCL1P53675 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLTCL1P53675 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
CLTCL1P53675 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLTCL1P53675 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLTCL1P53675 RNA5SP50-201ENST00000363731 107 ntBASIC5.17□□□□□ -1.58
CLTCL1P53675 MIR634-201ENST00000385208 97 ntBASIC5.17□□□□□ -1.58
CLTCL1P53675 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.17□□□□□ -1.58
CLTCL1P53675 RNA5SP104-201ENST00000410989 118 ntBASIC5.17□□□□□ -1.58
CLTCL1P53675 EIF4A1P11-201ENST00000451239 222 ntBASIC5.17□□□□□ -1.58
CLTCL1P53675 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.17□□□□□ -1.58
CLTCL1P53675 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.17□□□□□ -1.58
CLTCL1P53675 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.17□□□□□ -1.58
CLTCL1P53675 AC106782.4-201ENST00000568264 210 ntBASIC5.17□□□□□ -1.58
CLTCL1P53675 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.17□□□□□ -1.58
CLTCL1P53675 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLTCL1P53675 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.17□□□□□ -1.58
CLTCL1P53675 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLTCL1P53675 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLTCL1P53675 AC007685.1-201ENST00000329806 452 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 HSFY1P1-201ENST00000423928 1178 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 OR5AW1P-201ENST00000426334 1006 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 HIGD1AP12-201ENST00000427832 281 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 Z75741.1-201ENST00000446793 314 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.16□□□□□ -1.58
CLTCL1P53675 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLTCL1P53675 SETP6-201ENST00000479329 568 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 AC005476.1-201ENST00000554427 397 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.16□□□□□ -1.58
CLTCL1P53675 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.16□□□□□ -1.58
CLTCL1P53675 MRPS35P3-201ENST00000603189 709 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 AC005000.2-201ENST00000605468 310 ntBASIC5.16□□□□□ -1.58
CLTCL1P53675 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.16□□□□□ -1.58
CLTCL1P53675 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLTCL1P53675 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLTCL1P53675 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLTCL1P53675 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLTCL1P53675 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.16□□□□□ -1.58
CLTCL1P53675 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CLTCL1P53675 RNA5SP39-201ENST00000411245 120 ntBASIC5.15□□□□□ -1.58
CLTCL1P53675 SAGE2P-201ENST00000420011 2126 ntBASIC5.15□□□□□ -1.58
CLTCL1P53675 MOB1AP1-201ENST00000430903 535 ntBASIC5.15□□□□□ -1.58
CLTCL1P53675 AL035458.1-201ENST00000433096 585 ntBASIC5.15□□□□□ -1.58
CLTCL1P53675 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.15□□□□□ -1.58
CLTCL1P53675 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.15□□□□□ -1.58
CLTCL1P53675 IGHV3-63-201ENST00000518422 341 ntBASIC5.15□□□□□ -1.58
CLTCL1P53675 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLTCL1P53675 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.15□□□□□ -1.58
CLTCL1P53675 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.15□□□□□ -1.58
CLTCL1P53675 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.15□□□□□ -1.58
CLTCL1P53675 ZNF833P-201ENST00000424938 1494 ntBASIC5.15□□□□□ -1.58
CLTCL1P53675 NAMPTP1-201ENST00000440465 2514 ntBASIC5.15□□□□□ -1.58
CLTCL1P53675 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.15□□□□□ -1.58
CLTCL1P53675 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CLTCL1P53675 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLTCL1P53675 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
CLTCL1P53675 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.15□□□□□ -1.59
CLTCL1P53675 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLTCL1P53675 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.15□□□□□ -1.59
CLTCL1P53675 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLTCL1P53675 AC234772.1-201ENST00000377927 937 ntBASIC5.15□□□□□ -1.59
CLTCL1P53675 AL391219.1-201ENST00000422570 483 ntBASIC5.15□□□□□ -1.59
CLTCL1P53675 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.15□□□□□ -1.59
CLTCL1P53675 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.15□□□□□ -1.59
CLTCL1P53675 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLTCL1P53675 RPL26P28-201ENST00000451325 435 ntBASIC5.15□□□□□ -1.59
CLTCL1P53675 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.15□□□□□ -1.59
CLTCL1P53675 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLTCL1P53675 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.15□□□□□ -1.59
CLTCL1P53675 GMPSP1-201ENST00000514075 579 ntBASIC5.15□□□□□ -1.59
CLTCL1P53675 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.15□□□□□ -1.59
CLTCL1P53675 RNU2-27P-201ENST00000516185 142 ntBASIC5.15□□□□□ -1.59
CLTCL1P53675 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.15□□□□□ -1.59
CLTCL1P53675 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.15□□□□□ -1.59
CLTCL1P53675 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.15□□□□□ -1.59
CLTCL1P53675 AC006116.10-201ENST00000591836 581 ntBASIC5.15□□□□□ -1.59
CLTCL1P53675 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.15□□□□□ -1.59
CLTCL1P53675 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLTCL1P53675 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.14□□□□□ -1.59
CLTCL1P53675 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLTCL1P53675 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLTCL1P53675 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.14□□□□□ -1.59
CLTCL1P53675 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.14□□□□□ -1.59
CLTCL1P53675 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.14□□□□□ -1.59
CLTCL1P53675 BX119904.1-201ENST00000432026 348 ntBASIC5.14□□□□□ -1.59
CLTCL1P53675 AC092809.1-201ENST00000441469 474 ntBASIC5.14□□□□□ -1.59
CLTCL1P53675 RPL21P10-201ENST00000463521 490 ntBASIC5.14□□□□□ -1.59
CLTCL1P53675 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.14□□□□□ -1.59
CLTCL1P53675 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.14□□□□□ -1.59
CLTCL1P53675 AP006245.1-201ENST00000522549 120 ntBASIC5.14□□□□□ -1.59
CLTCL1P53675 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLTCL1P53675 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.14□□□□□ -1.59
CLTCL1P53675 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLTCL1P53675 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CLTCL1P53675 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLTCL1P53675 AC090337.1-201ENST00000579651 2074 ntBASIC5.13□□□□□ -1.59
CLTCL1P53675 MFSD8-233ENST00000641482 4860 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms