Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 BNIP3P41-201ENST00000503774 571 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 AC105233.3-201ENST00000531125 744 ntBASIC4.5□□□□□ -1.69
LHX1P48742 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 VN1R84P-201ENST00000593697 235 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AC125494.3-201ENST00000602759 455 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AC020910.2-201ENST00000603635 610 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AC233280.2-201ENST00000603917 1070 ntBASIC4.5□□□□□ -1.69
LHX1P48742 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX1P48742 FRG1HP-204ENST00000617940 757 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AL669942.2-201ENST00000620352 697 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LHX1P48742 AC138907.10-201ENST00000623708 983 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AC116563.2-201ENST00000624751 535 ntBASIC4.5□□□□□ -1.69
LHX1P48742 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX1P48742 SEC63P2-201ENST00000503863 1939 ntBASIC4.5□□□□□ -1.69
LHX1P48742 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 MFSD8-220ENST00000641243 1422 ntBASIC4.49□□□□□ -1.69
LHX1P48742 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
LHX1P48742 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 AL022722.2-201ENST00000402519 180 ntBASIC4.49□□□□□ -1.69
LHX1P48742 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.49□□□□□ -1.69
LHX1P48742 AC108032.1-201ENST00000416706 207 ntBASIC4.49□□□□□ -1.69
LHX1P48742 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.49□□□□□ -1.69
LHX1P48742 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.49□□□□□ -1.69
LHX1P48742 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.49□□□□□ -1.69
LHX1P48742 HSFY7P-201ENST00000432672 318 ntBASIC4.49□□□□□ -1.69
LHX1P48742 HSFY8P-201ENST00000437934 318 ntBASIC4.49□□□□□ -1.69
LHX1P48742 TPTE2P6-202ENST00000445572 1007 ntBASIC4.49□□□□□ -1.69
LHX1P48742 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.49□□□□□ -1.69
LHX1P48742 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.49□□□□□ -1.69
LHX1P48742 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 HSFY5P-201ENST00000453726 309 ntBASIC4.49□□□□□ -1.69
LHX1P48742 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 RNA5SP246-201ENST00000458909 119 ntBASIC4.49□□□□□ -1.69
LHX1P48742 RPS7P7-201ENST00000463499 571 ntBASIC4.49□□□□□ -1.69
LHX1P48742 ARL4AP1-201ENST00000503220 705 ntBASIC4.49□□□□□ -1.69
LHX1P48742 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 AC108043.1-201ENST00000512696 574 ntBASIC4.49□□□□□ -1.69
LHX1P48742 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.49□□□□□ -1.69
LHX1P48742 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
LHX1P48742 AC022882.1-201ENST00000532142 501 ntBASIC4.49□□□□□ -1.69
LHX1P48742 AC087894.1-201ENST00000538359 518 ntBASIC4.49□□□□□ -1.69
LHX1P48742 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 AC011611.5-201ENST00000552477 578 ntBASIC4.49□□□□□ -1.69
LHX1P48742 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.49□□□□□ -1.69
LHX1P48742 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.49□□□□□ -1.69
LHX1P48742 ATP5F1P7-201ENST00000567330 760 ntBASIC4.49□□□□□ -1.69
LHX1P48742 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.49□□□□□ -1.69
LHX1P48742 AL139022.2-201ENST00000606934 443 ntBASIC4.49□□□□□ -1.69
LHX1P48742 AC096586.1-201ENST00000610267 561 ntBASIC4.49□□□□□ -1.69
LHX1P48742 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 STMN1P1-201ENST00000617809 440 ntBASIC4.49□□□□□ -1.69
LHX1P48742 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 AC024595.1-201ENST00000623088 387 ntBASIC4.49□□□□□ -1.69
LHX1P48742 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.49□□□□□ -1.69
LHX1P48742 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 AC107027.3-201ENST00000565095 3473 ntBASIC4.49□□□□□ -1.69
LHX1P48742 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LHX1P48742 AC105074.1-201ENST00000623380 3095 ntBASIC4.49□□□□□ -1.69
LHX1P48742 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.48□□□□□ -1.69
LHX1P48742 MTND4P9-201ENST00000507819 1346 ntBASIC4.48□□□□□ -1.69
LHX1P48742 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LHX1P48742 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
LHX1P48742 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AP001273.1-201ENST00000624493 3152 ntBASIC4.48□□□□□ -1.69
LHX1P48742 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LHX1P48742 ENSAP3-201ENST00000312710 333 ntBASIC4.48□□□□□ -1.69
LHX1P48742 RNU6-543P-201ENST00000362576 108 ntBASIC4.48□□□□□ -1.69
LHX1P48742 MIR620-201ENST00000385232 95 ntBASIC4.48□□□□□ -1.69
LHX1P48742 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.48□□□□□ -1.69
LHX1P48742 FABP12P1-201ENST00000401911 322 ntBASIC4.48□□□□□ -1.69
LHX1P48742 MIR1303-201ENST00000408625 86 ntBASIC4.48□□□□□ -1.69
LHX1P48742 EIF4A1P3-201ENST00000411521 244 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms