Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL12P48061 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL12P48061 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL12P48061 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CXCL12P48061 MTND5P23-201ENST00000430812 1655 ntBASIC3.87□□□□□ -1.79
CXCL12P48061 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL12P48061 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL12P48061 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
CXCL12P48061 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CXCL12P48061 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL12P48061 NEAT1-202ENST00000501122 22743 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL12P48061 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CXCL12P48061 AC234772.1-201ENST00000377927 937 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 RNU6-729P-201ENST00000384399 107 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 MIR195-201ENST00000385194 87 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 SNORA3C-201ENST00000408792 125 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 AC098592.2-201ENST00000413158 265 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 OR51A6P-201ENST00000418680 1004 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL12P48061 SETD6P1-201ENST00000444575 317 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL12P48061 SETP6-201ENST00000479329 568 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 AC005726.1-201ENST00000494679 427 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 AC091917.2-201ENST00000505002 744 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 BTG4P1-201ENST00000510421 183 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL12P48061 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL12P48061 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL12P48061 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL12P48061 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL12P48061 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL12P48061 AC067838.1-201ENST00000606064 577 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL12P48061 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL12P48061 AC005858.4-201ENST00000623191 700 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 AP002967.1-201ENST00000624203 539 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 AL392088.2-201ENST00000637607 285 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL12P48061 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 AC074029.4-201ENST00000624796 1859 ntBASIC3.86□□□□□ -1.79
CXCL12P48061 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL12P48061 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL12P48061 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CXCL12P48061 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL12P48061 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL12P48061 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL12P48061 AC067945.1-201ENST00000342609 618 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 RNA5SP50-201ENST00000363731 107 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL12P48061 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.85□□□□□ -1.79
CXCL12P48061 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.85□□□□□ -1.79
CXCL12P48061 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL12P48061 AL390879.2-203ENST00000426943 1121 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 Z74696.2-201ENST00000436514 498 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 OR6C72P-201ENST00000451403 892 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 OR7L1P-201ENST00000456181 380 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 SNORD105B-201ENST00000458770 79 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 SEPT7P6-201ENST00000469999 1143 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL12P48061 HSPD1P15-201ENST00000505573 1122 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.85□□□□□ -1.79
CXCL12P48061 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL12P48061 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.85□□□□□ -1.79
CXCL12P48061 GTF2IP8-201ENST00000560687 584 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 AC122134.1-201ENST00000565664 1104 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.85□□□□□ -1.79
CXCL12P48061 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.85□□□□□ -1.79
CXCL12P48061 AC104662.1-201ENST00000604448 511 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 AC055839.1-201ENST00000634467 498 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL12P48061 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL12P48061 AP001273.1-201ENST00000624493 3152 ntBASIC3.85□□□□□ -1.79
CXCL12P48061 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL12P48061 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
CXCL12P48061 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL12P48061 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.84□□□□□ -1.79
CXCL12P48061 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL12P48061 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CXCL12P48061 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL12P48061 AC019155.1-201ENST00000382242 574 ntBASIC3.84□□□□□ -1.79
CXCL12P48061 MIR1271-201ENST00000408537 86 ntBASIC3.84□□□□□ -1.79
CXCL12P48061 ATP5A1P2-201ENST00000412323 255 ntBASIC3.84□□□□□ -1.79
CXCL12P48061 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL12P48061 AL391219.1-201ENST00000422570 483 ntBASIC3.84□□□□□ -1.79
CXCL12P48061 AC097713.2-201ENST00000430199 356 ntBASIC3.84□□□□□ -1.79
CXCL12P48061 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.84□□□□□ -1.79
CXCL12P48061 AC083863.1-201ENST00000438811 231 ntBASIC3.84□□□□□ -1.79
CXCL12P48061 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.84□□□□□ -1.79
CXCL12P48061 AC239798.3-201ENST00000454459 408 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms