Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VCANP13611 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
VCANP13611 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VCANP13611 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
VCANP13611 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VCANP13611 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VCANP13611 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.65□□□□□ -1.83
VCANP13611 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VCANP13611 OR13C3-201ENST00000374781 1108 ntBASIC3.65□□□□□ -1.83
VCANP13611 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.65□□□□□ -1.83
VCANP13611 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.65□□□□□ -1.83
VCANP13611 AC006557.5-201ENST00000603126 811 ntBASIC3.65□□□□□ -1.83
VCANP13611 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.65□□□□□ -1.83
VCANP13611 AL732618.1-201ENST00000623251 301 ntBASIC3.65□□□□□ -1.83
VCANP13611 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VCANP13611 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.65□□□□□ -1.83
VCANP13611 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VCANP13611 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VCANP13611 AF117829.1-206ENST00000621883 3802 ntBASIC3.64□□□□□ -1.83
VCANP13611 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 AL645937.1-201ENST00000641739 1652 ntBASIC3.64□□□□□ -1.83
VCANP13611 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.64□□□□□ -1.83
VCANP13611 RPS23P10-201ENST00000416185 486 ntBASIC3.64□□□□□ -1.83
VCANP13611 RPL21P40-201ENST00000428586 483 ntBASIC3.64□□□□□ -1.83
VCANP13611 AC005476.1-201ENST00000554427 397 ntBASIC3.64□□□□□ -1.83
VCANP13611 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VCANP13611 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 AC083843.3-201ENST00000623679 2186 ntBASIC3.64□□□□□ -1.83
VCANP13611 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.64□□□□□ -1.83
VCANP13611 AC025181.1-201ENST00000477507 416 ntBASIC3.64□□□□□ -1.83
VCANP13611 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.64□□□□□ -1.83
VCANP13611 RNA5SP116-201ENST00000516132 98 ntBASIC3.64□□□□□ -1.83
VCANP13611 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.64□□□□□ -1.83
VCANP13611 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.64□□□□□ -1.83
VCANP13611 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.64□□□□□ -1.83
VCANP13611 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.64□□□□□ -1.83
VCANP13611 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCANP13611 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.64□□□□□ -1.83
VCANP13611 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCANP13611 AL359643.1-201ENST00000404109 423 ntBASIC3.63□□□□□ -1.83
VCANP13611 RAP1BP1-201ENST00000412709 553 ntBASIC3.63□□□□□ -1.83
VCANP13611 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.63□□□□□ -1.83
VCANP13611 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.63□□□□□ -1.83
VCANP13611 CBX1P4-201ENST00000439415 457 ntBASIC3.63□□□□□ -1.83
VCANP13611 snoU13.15-201ENST00000459407 104 ntBASIC3.63□□□□□ -1.83
VCANP13611 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.63□□□□□ -1.83
VCANP13611 AC022080.3-201ENST00000544433 482 ntBASIC3.63□□□□□ -1.83
VCANP13611 AC016839.1-201ENST00000578162 867 ntBASIC3.63□□□□□ -1.83
VCANP13611 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.63□□□□□ -1.83
VCANP13611 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
VCANP13611 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC3.63□□□□□ -1.83
VCANP13611 AC107398.3-201ENST00000562284 7000 ntBASIC3.63□□□□□ -1.83
VCANP13611 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.63□□□□□ -1.83
VCANP13611 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VCANP13611 ZNF90P1-201ENST00000480493 1951 ntBASIC3.63□□□□□ -1.83
VCANP13611 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCANP13611 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
VCANP13611 AL513174.1-201ENST00000423182 629 ntBASIC3.63□□□□□ -1.83
VCANP13611 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.63□□□□□ -1.83
VCANP13611 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.63□□□□□ -1.83
VCANP13611 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.63□□□□□ -1.83
VCANP13611 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.63□□□□□ -1.83
VCANP13611 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.63□□□□□ -1.83
VCANP13611 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.63□□□□□ -1.83
VCANP13611 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VCANP13611 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCANP13611 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.63□□□□□ -1.83
VCANP13611 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCANP13611 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VCANP13611 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC3.63□□□□□ -1.83
VCANP13611 SEPT7P2-202ENST00000398921 823 ntBASIC3.63□□□□□ -1.83
VCANP13611 AL450338.1-201ENST00000407987 512 ntBASIC3.63□□□□□ -1.83
VCANP13611 MAPRE1P3-201ENST00000435438 796 ntBASIC3.63□□□□□ -1.83
VCANP13611 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.63□□□□□ -1.83
VCANP13611 RPL7P38-201ENST00000488396 739 ntBASIC3.63□□□□□ -1.83
VCANP13611 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.63□□□□□ -1.83
VCANP13611 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.63□□□□□ -1.83
VCANP13611 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCANP13611 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
VCANP13611 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VCANP13611 AC007685.1-201ENST00000329806 452 ntBASIC3.62□□□□□ -1.83
VCANP13611 MIR1287-201ENST00000408492 90 ntBASIC3.62□□□□□ -1.83
VCANP13611 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.62□□□□□ -1.83
VCANP13611 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.62□□□□□ -1.83
VCANP13611 RNA5SP356-201ENST00000515972 94 ntBASIC3.62□□□□□ -1.83
VCANP13611 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.62□□□□□ -1.83
VCANP13611 AC103710.3-201ENST00000608157 948 ntBASIC3.62□□□□□ -1.83
VCANP13611 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
VCANP13611 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCANP13611 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VCANP13611 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
VCANP13611 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.62□□□□□ -1.83
VCANP13611 PGBD4P8-201ENST00000412993 562 ntBASIC3.62□□□□□ -1.83
VCANP13611 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms