| MT1A | P04731 | ZNF962P-201 | ENST00000443465 | 3140 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MT1A | P04731 | PCLO-206 | ENST00000437081 | 3786 nt | TSL 1 (best) BASIC | 1.14 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC021355.1-202 | ENST00000519996 | 1633 nt | TSL 2 BASIC | 1.14 | □□□□□ -2.23 | | |
| MT1A | P04731 | TLR10-206 | ENST00000508334 | 2616 nt | APPRIS P1 TSL 1 (best) BASIC | 1.14 | □□□□□ -2.23 | | |
| MT1A | P04731 | LINC01094-203 | ENST00000504675 | 1985 nt | TSL 2 BASIC | 1.14 | □□□□□ -2.23 | | |
| MT1A | P04731 | FAM91A3P-201 | ENST00000456826 | 2544 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| MT1A | P04731 | FMNL2-202 | ENST00000475377 | 3648 nt | TSL 5 BASIC | 1.14 | □□□□□ -2.23 | | |
| MT1A | P04731 | PCDH11X-205 | ENST00000373094 | 9179 nt | APPRIS P4 TSL 1 (best) BASIC | 1.14 | □□□□□ -2.23 | | |
| MT1A | P04731 | ERMN-205 | ENST00000410096 | 3793 nt | APPRIS P1 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | TMPRSS11A-202 | ENST00000508048 | 3247 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC134882.1-201 | ENST00000603738 | 1676 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | PTPN22-211 | ENST00000538253 | 3575 nt | TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RAD17-208 | ENST00000380774 | 2117 nt | APPRIS P1 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | TOPORSLP1-201 | ENST00000467693 | 2102 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | PAPOLA-202 | ENST00000392990 | 2588 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC090510.1-202 | ENST00000500850 | 2017 nt | TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | MTUS1-216 | ENST00000519263 | 4089 nt | TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | GABRG2-213 | ENST00000639046 | 3058 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RXFP1-205 | ENST00000448688 | 3861 nt | TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | DOCK7-202 | ENST00000340370 | 6731 nt | APPRIS P3 TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | PPP1R12A-204 | ENST00000546369 | 2977 nt | TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | MLF1-208 | ENST00000478894 | 1372 nt | TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | FAM208A-202 | ENST00000431842 | 7119 nt | TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | OR4F6-201 | ENST00000328882 | 1238 nt | APPRIS P1 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RNU6-984P-201 | ENST00000363236 | 109 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | CD84-204 | ENST00000368048 | 1098 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | CD84-205 | ENST00000368051 | 965 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | U8.11-201 | ENST00000384699 | 133 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | U8.12-201 | ENST00000384701 | 133 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | MIR554-201 | ENST00000384874 | 96 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | IGLV5-37-201 | ENST00000390300 | 374 nt | APPRIS P1 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | SOD2P1-201 | ENST00000396543 | 562 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL590704.1-201 | ENST00000402856 | 794 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | Z85994.1-201 | ENST00000406912 | 606 nt | TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | HNMT-204 | ENST00000410115 | 1150 nt | APPRIS P1 TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RN7SKP285-201 | ENST00000410137 | 318 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC062031.1-201 | ENST00000414967 | 747 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | FAM230B-202 | ENST00000415704 | 396 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC096644.3-201 | ENST00000416788 | 338 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | HMGB3P20-201 | ENST00000417997 | 600 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RPL36AP36-201 | ENST00000418616 | 301 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | GCG-202 | ENST00000418842 | 1289 nt | APPRIS P1 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | GPC5-AS1-201 | ENST00000419288 | 393 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC013470.3-201 | ENST00000420252 | 1194 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL159169.1-201 | ENST00000421119 | 127 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | LINC01468-201 | ENST00000422763 | 570 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | OR4F13P-201 | ENST00000428478 | 931 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL590302.1-201 | ENST00000431017 | 359 nt | TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL445584.1-201 | ENST00000431451 | 330 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL035246.1-201 | ENST00000433554 | 1255 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | LINC00302-201 | ENST00000444515 | 302 nt | TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC005358.1-201 | ENST00000445508 | 1143 nt | TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RPS3AP46-201 | ENST00000448352 | 682 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL133547.1-201 | ENST00000448546 | 220 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | NDUFS5P3-201 | ENST00000450668 | 321 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC099563.1-201 | ENST00000456086 | 418 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC005229.2-201 | ENST00000456995 | 399 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | UBDP1-202 | ENST00000457888 | 382 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC096554.1-201 | ENST00000458182 | 529 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL034349.1-201 | ENST00000458367 | 549 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | U8.18-201 | ENST00000459285 | 133 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC107015.1-201 | ENST00000466902 | 747 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC022034.3-201 | ENST00000471393 | 478 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | UBE2CP3-201 | ENST00000502715 | 450 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC021146.1-201 | ENST00000511202 | 716 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | USP9YP5-201 | ENST00000511770 | 630 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | LINC02278-201 | ENST00000512170 | 500 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | ARL2BPP6-201 | ENST00000512757 | 439 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | MTND4LP31-201 | ENST00000514859 | 294 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | SNORA26.10-201 | ENST00000516427 | 141 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RN7SKP60-201 | ENST00000516985 | 239 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RANP9-201 | ENST00000519957 | 271 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC136424.2-201 | ENST00000522582 | 563 nt | TSL 4 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC007991.1-201 | ENST00000522680 | 631 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AP000926.4-201 | ENST00000527351 | 454 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AP001360.2-201 | ENST00000534423 | 562 nt | TSL 4 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AP002892.1-201 | ENST00000537727 | 550 nt | TSL 4 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RFPL1S-203 | ENST00000539579 | 330 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC006065.3-201 | ENST00000541769 | 419 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL121766.1-201 | ENST00000547436 | 487 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC027288.1-203 | ENST00000552167 | 567 nt | TSL 4 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL355922.1-201 | ENST00000555624 | 337 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC009558.2-201 | ENST00000558258 | 396 nt | TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | IGKV2OR2-8-201 | ENST00000558710 | 300 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC006960.3-201 | ENST00000561845 | 705 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC007342.4-202 | ENST00000565189 | 721 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | MMP2-AS1-202 | ENST00000569037 | 553 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AP001180.2-201 | ENST00000579413 | 422 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | MIR4425-201 | ENST00000580572 | 84 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC006130.2-201 | ENST00000586202 | 326 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AP001542.3-201 | ENST00000587619 | 527 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AP005264.4-201 | ENST00000592203 | 422 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | LINC01905-206 | ENST00000593180 | 524 nt | TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC112230.1-201 | ENST00000604342 | 547 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AC115621.1-201 | ENST00000604653 | 858 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL163642.2-201 | ENST00000604722 | 1019 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL109618.2-201 | ENST00000605527 | 211 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL391497.1-201 | ENST00000608671 | 547 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | AL592295.2-201 | ENST00000612578 | 206 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| MT1A | P04731 | RNVU1-4-201 | ENST00000612985 | 164 nt | BASIC | 1.13 | □□□□□ -2.23 | | |