Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CASC19-204ENST00000641001 2055 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC010300.1-201ENST00000600671 5134 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC092745.2-202ENST00000411880 369 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 MTND4P22-201ENST00000413116 1169 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AL365203.2-201ENST00000423444 196 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 OR5AW1P-201ENST00000426334 1006 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 CNOT7P1-201ENST00000429006 852 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 CDY12P-201ENST00000440679 1015 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 ARL5AP2-201ENST00000444698 533 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 CDY13P-201ENST00000445813 1015 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC005002.1-201ENST00000447458 540 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 IGLV2-34-201ENST00000490007 283 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC022882.1-201ENST00000532142 501 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC138393.1-206ENST00000540997 1886 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC010198.2-201ENST00000550612 259 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AADACP1-206ENST00000561502 1193 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 MTCYBP28-201ENST00000566728 1132 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 MIR4284-201ENST00000578924 81 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 NBR2-204ENST00000587322 63 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC133552.5-201ENST00000604266 540 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AL392112.1-201ENST00000605115 829 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AC099676.1-201ENST00000608886 657 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 MIR378J-201ENST00000611988 109 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 CCT8P1-201ENST00000413611 1657 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 VPS35P1-201ENST00000563400 1518 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 MAPK10-320ENST00000641462 6696 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC107027.3-201ENST00000565095 3473 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 Y_RNA.318-201ENST00000365131 97 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 Y_RNA.465-201ENST00000384293 102 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 SNORA70.10-201ENST00000384515 134 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 SEPT2P1-201ENST00000419651 180 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 RPL7P53-201ENST00000421245 739 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC005345.1-201ENST00000431868 217 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 MTCO3P5-201ENST00000433620 714 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 RPL7P29-201ENST00000437151 728 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 CACYBPP1-201ENST00000438592 684 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 MTND6P18-201ENST00000439477 513 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 RPS5P7-201ENST00000456664 608 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 MTND2P28-201ENST00000457540 1044 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 TPTE2P5-203ENST00000458118 728 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC010326.1-201ENST00000462726 602 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 RN7SL459P-201ENST00000481078 302 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC104687.1-201ENST00000485829 412 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 IGKV2D-10-201ENST00000520194 281 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms