Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AC006499.5-201ENST00000505037 514 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AC104619.4-201ENST00000510773 249 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 OR8I1P-201ENST00000529291 931 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AP000619.3-201ENST00000535634 1127 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 EIF1P6-201ENST00000600054 334 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AP000542.2-201ENST00000623199 6179 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 SCN1A-220ENST00000641603 12506 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 MIR93-201ENST00000385024 80 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 RPL7AP73-201ENST00000413490 353 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC114814.2-201ENST00000419195 485 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 RPL23AP82-202ENST00000427528 469 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AL645931.1-201ENST00000439737 410 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 RN7SL271P-201ENST00000487601 295 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 RAC1P2-201ENST00000511164 579 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AL121834.1-201ENST00000572284 509 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 MIR5187-201ENST00000583479 76 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 SNORA51-201ENST00000606420 132 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC084757.4-201ENST00000616350 526 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC067931.1-201ENST00000624190 671 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 ATE1-AS1-202ENST00000636460 506 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC009093.8-201ENST00000641769 292 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC024560.2-201ENST00000507981 1497 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 MAPK10-320ENST00000641462 6696 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 RPL17P50-201ENST00000396131 546 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 HMGB3P20-201ENST00000417997 600 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AL451050.1-201ENST00000450126 415 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 RPS4XP2-201ENST00000458402 793 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AP000859.1-201ENST00000525536 307 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AL358913.1-201ENST00000554342 121 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC019176.2-201ENST00000611579 315 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AL158196.1-201ENST00000616786 434 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC016957.2-201ENST00000616998 848 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 AC107021.2-201ENST00000567714 2095 ntBASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KIAA1549Q9HCM3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 AC245100.2-201ENST00000454544 1679 ntBASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 AC013410.1-201ENST00000436223 1232 ntBASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 AC092809.1-201ENST00000441469 474 ntBASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 AC133473.1-201ENST00000455173 299 ntBASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 AC108941.1-201ENST00000502853 530 ntBASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 SNORA70.18-201ENST00000516696 98 ntBASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KIAA1549Q9HCM3 OR52B1P-201ENST00000316506 909 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 SYF2P2-201ENST00000417620 583 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms