Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 MTCO3P23-201ENST00000561363 289 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 MIR3137-201ENST00000577367 75 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 MIR4327-201ENST00000581194 85 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC100830.2-201ENST00000581636 240 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC069061.3-201ENST00000582254 823 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 MIR3942-201ENST00000585264 109 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 GLYATL1P2-202ENST00000588046 902 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 VN1R107P-201ENST00000601784 209 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL355812.1-201ENST00000603215 216 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL122127.1-201ENST00000603832 327 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC024085.1-201ENST00000604299 432 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC124312.5-201ENST00000604451 268 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC091193.1-201ENST00000604640 448 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC012443.1-201ENST00000605605 231 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC009779.8-202ENST00000607990 932 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 MIR6745-201ENST00000612694 127 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC116447.1-201ENST00000613153 453 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL121809.2-201ENST00000613169 341 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 IGKV1OR1-1-201ENST00000613775 347 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 Metazoa_SRP.155-201ENST00000616367 282 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC087588.2-201ENST00000617667 426 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RMST_9.1-201ENST00000619945 193 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC011840.6-201ENST00000624536 610 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC129908.1-201ENST00000624553 648 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 TTC38-207ENST00000629918 162 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 MTND4LP32-201ENST00000636111 270 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 BIN2P1-201ENST00000504996 1530 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PANDAR-201ENST00000629595 1506 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 TTC41P-205ENST00000551270 3963 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC005618.1-201ENST00000606901 3148 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 TNPO1P2-201ENST00000426249 2665 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL022311.1-201ENST00000623726 19416 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AL137141.1-201ENST00000624622 4836 ntBASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AOX3P-204ENST00000491025 2107 ntBASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 TPTE2P4-201ENST00000258589 1605 ntBASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms