Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TRIM41Q8WV44 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TRIM41Q8WV44 AC021242.1-201ENST00000507315 2035 ntBASIC10.11□□□□□ -0.79
TRIM41Q8WV44 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TRIM41Q8WV44 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TRIM41Q8WV44 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 ALB-209ENST00000503124 1741 ntTSL 5 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC010168.2-201ENST00000562691 5428 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 SNORA51.12-201ENST00000384448 134 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 PEX12P1-201ENST00000400284 1048 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AL592293.2-201ENST00000422292 996 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 BX890604.2-201ENST00000427883 474 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AL390119.1-201ENST00000440329 312 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 RPS7P3-201ENST00000443360 580 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC022034.3-201ENST00000471393 478 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 CASC19-203ENST00000523510 575 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC022916.3-201ENST00000592961 742 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC090527.3-201ENST00000619041 548 ntBASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TRIM41Q8WV44 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 RNU6-1066P-201ENST00000363573 105 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AL450992.3-201ENST00000413192 568 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC093084.1-201ENST00000424233 687 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC127526.2-201ENST00000426436 775 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 MTCO3P21-201ENST00000430791 643 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 GTF2IP20-201ENST00000431663 360 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 MRPL50P4-201ENST00000446432 475 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC104164.1-201ENST00000460282 590 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC034236.1-201ENST00000469891 373 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AL122020.1-201ENST00000472287 459 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC027667.1-201ENST00000545814 304 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 RPL21P5-201ENST00000554662 472 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AL845331.3-202ENST00000562856 261 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 MIR3682-201ENST00000581338 84 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC209154.1-201ENST00000582156 337 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 RMST_3.1-201ENST00000611651 109 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC009268.2-201ENST00000621925 457 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 CU639417.4-201ENST00000623928 207 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 AC066616.2-201ENST00000559334 1481 ntBASIC10.09□□□□□ -0.79
TRIM41Q8WV44 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TRIM41Q8WV44 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 OR4A15-201ENST00000314706 1035 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 RNU6-1103P-201ENST00000384150 107 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 AL354719.1-201ENST00000406535 843 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 AL590806.1-201ENST00000415818 853 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 RAD23BP1-201ENST00000421404 1227 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 NPM1P34-201ENST00000428821 893 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 AL445928.1-201ENST00000435545 222 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 AC099563.1-201ENST00000456086 418 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 RPL7P39-201ENST00000481157 744 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC10.08□□□□□ -0.8
TRIM41Q8WV44 SNORA70.11-201ENST00000515987 138 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 SNORA70.13-201ENST00000516116 138 ntBASIC10.08□□□□□ -0.8
TRIM41Q8WV44 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms