Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC063976.2-201ENST00000425667 3556 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 ELL2P4-201ENST00000446870 1376 ntBASIC5.01□□□□□ -1.61
RNF220Q5VTB9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF220Q5VTB9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RNF220Q5VTB9 OFD1P9Y-201ENST00000417699 1491 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5□□□□□ -1.61
RNF220Q5VTB9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF220Q5VTB9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RNF220Q5VTB9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF220Q5VTB9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF220Q5VTB9 AL513185.3-201ENST00000433335 1300 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5□□□□□ -1.61
RNF220Q5VTB9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5□□□□□ -1.61
RNF220Q5VTB9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5□□□□□ -1.61
RNF220Q5VTB9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5□□□□□ -1.61
RNF220Q5VTB9 SNRPEP2-201ENST00000397592 279 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 MIR1302-8-201ENST00000408342 128 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF220Q5VTB9 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5□□□□□ -1.61
RNF220Q5VTB9 MTCYBP38-201ENST00000417160 1123 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 RPL24P2-201ENST00000421023 475 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 RPS3P2-201ENST00000421346 701 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AL138785.1-201ENST00000425821 331 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 FMO7P-201ENST00000436045 768 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5□□□□□ -1.61
RNF220Q5VTB9 MTND4P6-201ENST00000438297 472 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5□□□□□ -1.61
RNF220Q5VTB9 VN1R10P-201ENST00000447106 875 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF220Q5VTB9 TRBV26-201ENST00000456572 344 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AL445433.1-201ENST00000457507 257 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC084754.1-201ENST00000463466 464 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC108078.3-201ENST00000502633 489 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 MTCYBP37-201ENST00000510642 1133 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5□□□□□ -1.61
RNF220Q5VTB9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5□□□□□ -1.61
RNF220Q5VTB9 RNA5SP360-201ENST00000516555 118 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC134698.5-201ENST00000519444 336 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5□□□□□ -1.61
RNF220Q5VTB9 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5□□□□□ -1.61
RNF220Q5VTB9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5□□□□□ -1.61
RNF220Q5VTB9 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5□□□□□ -1.61
RNF220Q5VTB9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5□□□□□ -1.61
RNF220Q5VTB9 AP000769.2-201ENST00000602344 396 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5□□□□□ -1.61
RNF220Q5VTB9 AC010738.1-201ENST00000604970 987 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC080013.6-201ENST00000606185 215 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF220Q5VTB9 AC244107.2-201ENST00000611773 76 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC243773.3-201ENST00000613270 256 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC008115.3-201ENST00000614874 549 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC091931.1-201ENST00000623488 728 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC231657.1-201ENST00000624313 397 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5□□□□□ -1.61
RNF220Q5VTB9 FAM157B-203ENST00000639350 358 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
RNF220Q5VTB9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5□□□□□ -1.61
RNF220Q5VTB9 AL079343.1-201ENST00000572358 1771 ntBASIC5□□□□□ -1.61
RNF220Q5VTB9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF220Q5VTB9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RNF220Q5VTB9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AL122126.1-201ENST00000546905 1318 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 MTND5P24-201ENST00000438892 1767 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 Y_RNA.18-201ENST00000362461 102 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RNU6-1226P-201ENST00000384317 107 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RNA5SP122-201ENST00000384457 108 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RNA5SP284-201ENST00000384547 118 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 SSXP10-201ENST00000402595 565 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 NPM1P34-201ENST00000428821 893 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RPL35AP21-201ENST00000437667 333 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 SUMO2P3-201ENST00000438311 288 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 ARL4AP3-201ENST00000441452 574 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 EEF1B2P6-201ENST00000445713 673 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RPL39P6-201ENST00000448289 150 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC097262.1-201ENST00000452559 548 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AL035090.1-201ENST00000454835 332 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 USP9YP10-201ENST00000454868 628 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RPL7P1-201ENST00000468161 747 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms