Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC019072.1-201ENST00000604535 1551 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 RPL21P10-201ENST00000463521 490 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC110801.1-201ENST00000623590 212 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC063952.1-203ENST00000634410 658 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 U3.44-201ENST00000458938 192 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC113192.3-201ENST00000529152 742 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC010168.2-201ENST00000562691 5428 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC108206.1-201ENST00000570186 4159 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 RPL5P18-201ENST00000406671 891 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 RNA5SP39-201ENST00000411245 120 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 RNF19BPX-201ENST00000426224 625 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 TRBV12-2-201ENST00000489763 344 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 AC097462.2-201ENST00000504623 481 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 AC138409.2-202ENST00000507274 458 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 AC015802.5-201ENST00000607478 399 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 MAPK10-286ENST00000641208 8747 ntBASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.4□□□□□ -2.02
VPS13DQ5THJ4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC008489.1-201ENST00000524271 483 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC023161.2-201ENST00000551218 780 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC007529.1-201ENST00000418574 2178 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 NACA3P-201ENST00000359690 648 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 NPM1P17-201ENST00000479221 602 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC233702.9-201ENST00000581528 203 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC084036.1-201ENST00000609190 508 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 RNA5SP229-201ENST00000410809 99 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AL353705.1-201ENST00000433468 480 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 MIR4433B-201ENST00000581329 102 ntBASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS13DQ5THJ4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms