Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 RPL21P6-201ENST00000479171 504 ntBASIC4.55□□□□□ -1.68
SCN7AQ01118 AC025518.1-201ENST00000479856 347 ntBASIC4.55□□□□□ -1.68
SCN7AQ01118 AC010342.1-201ENST00000514047 877 ntBASIC4.55□□□□□ -1.68
SCN7AQ01118 RNU2-27P-201ENST00000516185 142 ntBASIC4.55□□□□□ -1.68
SCN7AQ01118 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN7AQ01118 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SCN7AQ01118 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN7AQ01118 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN7AQ01118 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.55□□□□□ -1.68
SCN7AQ01118 AL583832.1-201ENST00000603227 784 ntBASIC4.55□□□□□ -1.68
SCN7AQ01118 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN7AQ01118 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN7AQ01118 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN7AQ01118 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN7AQ01118 AL442128.2-201ENST00000620246 1824 ntBASIC4.55□□□□□ -1.68
SCN7AQ01118 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN7AQ01118 AC093535.2-201ENST00000624769 2326 ntBASIC4.55□□□□□ -1.68
SCN7AQ01118 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN7AQ01118 Z75741.1-201ENST00000446793 314 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 AC073587.1-201ENST00000447093 876 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 AC010655.1-201ENST00000449336 292 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 UBA52P3-201ENST00000491303 382 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN7AQ01118 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN7AQ01118 RNA5SP154-201ENST00000516193 111 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN7AQ01118 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN7AQ01118 SETP1-201ENST00000556014 845 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN7AQ01118 MIR4325-201ENST00000583049 90 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 OR5AC4P-202ENST00000642086 985 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
SCN7AQ01118 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN7AQ01118 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
SCN7AQ01118 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN7AQ01118 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN7AQ01118 AC139426.3-201ENST00000605648 2059 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 RNA5SP197-201ENST00000363357 119 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 MIR128-1-201ENST00000384921 82 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 RNA5SP120-201ENST00000410900 112 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 RN7SKP53-201ENST00000411337 315 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.54□□□□□ -1.68
SCN7AQ01118 AL035458.1-201ENST00000433096 585 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN7AQ01118 AC006480.1-201ENST00000449887 378 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN7AQ01118 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN7AQ01118 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN7AQ01118 AC015722.2-201ENST00000622210 551 ntBASIC4.54□□□□□ -1.68
SCN7AQ01118 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN7AQ01118 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN7AQ01118 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN7AQ01118 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN7AQ01118 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SCN7AQ01118 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.53□□□□□ -1.68
SCN7AQ01118 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN7AQ01118 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN7AQ01118 MIR513A2-201ENST00000385249 127 ntBASIC4.53□□□□□ -1.68
SCN7AQ01118 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN7AQ01118 OR2X1P-201ENST00000421144 687 ntBASIC4.53□□□□□ -1.68
SCN7AQ01118 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN7AQ01118 BTF3P5-201ENST00000457252 467 ntBASIC4.53□□□□□ -1.68
SCN7AQ01118 AC017015.1-201ENST00000477387 286 ntBASIC4.53□□□□□ -1.68
SCN7AQ01118 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN7AQ01118 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN7AQ01118 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN7AQ01118 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN7AQ01118 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN7AQ01118 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.53□□□□□ -1.68
SCN7AQ01118 MFSD8-233ENST00000641482 4860 ntBASIC4.53□□□□□ -1.68
SCN7AQ01118 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN7AQ01118 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN7AQ01118 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN7AQ01118 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN7AQ01118 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN7AQ01118 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN7AQ01118 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN7AQ01118 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN7AQ01118 AC118273.1-201ENST00000525324 3006 ntBASIC4.52□□□□□ -1.69
SCN7AQ01118 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN7AQ01118 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SCN7AQ01118 Y_RNA.111-201ENST00000363248 100 ntBASIC4.52□□□□□ -1.69
SCN7AQ01118 SDCBPP2-201ENST00000424643 885 ntBASIC4.52□□□□□ -1.69
SCN7AQ01118 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN7AQ01118 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN7AQ01118 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN7AQ01118 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN7AQ01118 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN7AQ01118 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.52□□□□□ -1.69
SCN7AQ01118 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.52□□□□□ -1.69
SCN7AQ01118 MIR5186-201ENST00000577504 120 ntBASIC4.52□□□□□ -1.69
SCN7AQ01118 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN7AQ01118 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN7AQ01118 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN7AQ01118 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SCN7AQ01118 AC092435.4-201ENST00000623012 4159 ntBASIC4.51□□□□□ -1.69
SCN7AQ01118 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SCN7AQ01118 AC092447.2-201ENST00000435487 669 ntBASIC4.51□□□□□ -1.69
SCN7AQ01118 FTH1P25-201ENST00000447665 469 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms