Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.65□□□□□ -1.67
CCNA1P78396 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCNA1P78396 AC108145.1-201ENST00000503770 153 ntBASIC4.65□□□□□ -1.67
CCNA1P78396 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCNA1P78396 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
CCNA1P78396 AC022884.3-201ENST00000579571 248 ntBASIC4.65□□□□□ -1.67
CCNA1P78396 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.65□□□□□ -1.67
CCNA1P78396 SNORD91B-202ENST00000608459 222 ntBASIC4.65□□□□□ -1.67
CCNA1P78396 AL353726.1-201ENST00000614041 1000 ntBASIC4.65□□□□□ -1.67
CCNA1P78396 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.65□□□□□ -1.67
CCNA1P78396 AC005086.4-201ENST00000623065 213 ntBASIC4.65□□□□□ -1.67
CCNA1P78396 AC000123.2-201ENST00000623124 461 ntBASIC4.65□□□□□ -1.67
CCNA1P78396 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.65□□□□□ -1.67
CCNA1P78396 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCNA1P78396 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
CCNA1P78396 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.65□□□□□ -1.67
CCNA1P78396 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCNA1P78396 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCNA1P78396 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCNA1P78396 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCNA1P78396 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCNA1P78396 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.64□□□□□ -1.67
CCNA1P78396 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CCNA1P78396 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.64□□□□□ -1.67
CCNA1P78396 RAB9AP3-201ENST00000412737 573 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.64□□□□□ -1.67
CCNA1P78396 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.64□□□□□ -1.67
CCNA1P78396 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.64□□□□□ -1.67
CCNA1P78396 RAB9AP1-201ENST00000449393 573 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 RN7SL323P-201ENST00000494712 295 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 PRELID3BP7-201ENST00000503606 469 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNA1P78396 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.64□□□□□ -1.67
CCNA1P78396 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.64□□□□□ -1.67
CCNA1P78396 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.64□□□□□ -1.67
CCNA1P78396 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.64□□□□□ -1.67
CCNA1P78396 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNA1P78396 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNA1P78396 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.64□□□□□ -1.67
CCNA1P78396 AC016957.2-201ENST00000616998 848 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 MIR7702-201ENST00000621931 59 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 AC067852.7-201ENST00000623270 535 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 AP005264.7-201ENST00000625003 745 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 PNPT1P2-201ENST00000456768 2050 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CCNA1P78396 AL133412.1-201ENST00000380194 2992 ntBASIC4.64□□□□□ -1.67
CCNA1P78396 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCNA1P78396 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCNA1P78396 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCNA1P78396 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.63□□□□□ -1.67
CCNA1P78396 OR51C1P-202ENST00000641159 1444 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCNA1P78396 AL356489.2-201ENST00000566968 3528 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCNA1P78396 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCNA1P78396 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCNA1P78396 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCNA1P78396 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCNA1P78396 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CCNA1P78396 MIR208A-201ENST00000362287 71 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 SNORA63.1-201ENST00000362493 131 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 RNA5SP124-201ENST00000362739 110 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 RNA5SP387-201ENST00000364226 106 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 MIR30B-201ENST00000384850 88 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.63□□□□□ -1.67
CCNA1P78396 CYP4F29P-201ENST00000420685 446 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 AJ239321.1-201ENST00000424255 564 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 RPL23AP89-201ENST00000439324 255 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 RPS20P21-201ENST00000466859 343 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 RPS3AP6-201ENST00000484430 795 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 ARL4AP1-201ENST00000503220 705 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.63□□□□□ -1.67
CCNA1P78396 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.63□□□□□ -1.67
CCNA1P78396 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.63□□□□□ -1.67
CCNA1P78396 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.63□□□□□ -1.67
CCNA1P78396 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.63□□□□□ -1.67
CCNA1P78396 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.63□□□□□ -1.67
CCNA1P78396 AL451044.1-201ENST00000604867 238 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 AL391834.1-201ENST00000609609 560 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.63□□□□□ -1.67
CCNA1P78396 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.63□□□□□ -1.67
CCNA1P78396 AC087190.4-201ENST00000574616 8334 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.63□□□□□ -1.67
CCNA1P78396 AL139811.1-201ENST00000424779 2299 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCNA1P78396 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCNA1P78396 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.63□□□□□ -1.67
CCNA1P78396 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.63□□□□□ -1.67
CCNA1P78396 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCNA1P78396 AC018529.3-201ENST00000624212 2254 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCNA1P78396 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.62□□□□□ -1.67
CCNA1P78396 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.62□□□□□ -1.67
CCNA1P78396 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCNA1P78396 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCNA1P78396 SNORD35B-201ENST00000363660 87 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.62□□□□□ -1.67
CCNA1P78396 DPY19L1P2-201ENST00000426647 915 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms