Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SNORA62.2-201ENST00000364672 152 ntBASIC3.88□□□□□ -1.79
LIM2P55344 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 SNORA70C-201ENST00000384538 135 ntBASIC3.88□□□□□ -1.79
LIM2P55344 RNU11-4P-201ENST00000391149 133 ntBASIC3.88□□□□□ -1.79
LIM2P55344 HMGB1P13-201ENST00000406019 642 ntBASIC3.88□□□□□ -1.79
LIM2P55344 PGBD4P8-201ENST00000412993 562 ntBASIC3.88□□□□□ -1.79
LIM2P55344 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.88□□□□□ -1.79
LIM2P55344 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.88□□□□□ -1.79
LIM2P55344 MRPL50P1-201ENST00000431951 384 ntBASIC3.88□□□□□ -1.79
LIM2P55344 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.88□□□□□ -1.79
LIM2P55344 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.88□□□□□ -1.79
LIM2P55344 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.88□□□□□ -1.79
LIM2P55344 ELOCP3-201ENST00000439303 348 ntBASIC3.88□□□□□ -1.79
LIM2P55344 MED6P1-201ENST00000439659 713 ntBASIC3.88□□□□□ -1.79
LIM2P55344 RPS27P5-201ENST00000444247 244 ntBASIC3.88□□□□□ -1.79
LIM2P55344 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.88□□□□□ -1.79
LIM2P55344 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.88□□□□□ -1.79
LIM2P55344 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.88□□□□□ -1.79
LIM2P55344 PPIAP21-201ENST00000464473 501 ntBASIC3.88□□□□□ -1.79
LIM2P55344 AC108729.2-201ENST00000476543 840 ntBASIC3.88□□□□□ -1.79
LIM2P55344 RPL29P14-201ENST00000495837 428 ntBASIC3.88□□□□□ -1.79
LIM2P55344 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.88□□□□□ -1.79
LIM2P55344 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.88□□□□□ -1.79
LIM2P55344 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.88□□□□□ -1.79
LIM2P55344 KRT19P6-201ENST00000510983 209 ntBASIC3.88□□□□□ -1.79
LIM2P55344 SNORA26.10-201ENST00000516427 141 ntBASIC3.88□□□□□ -1.79
LIM2P55344 RNU7-143P-201ENST00000516781 65 ntBASIC3.88□□□□□ -1.79
LIM2P55344 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
LIM2P55344 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 NPM1P47-201ENST00000560843 856 ntBASIC3.88□□□□□ -1.79
LIM2P55344 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.88□□□□□ -1.79
LIM2P55344 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 ZNF92P2-201ENST00000600543 1059 ntBASIC3.88□□□□□ -1.79
LIM2P55344 PSMA6P4-201ENST00000603247 718 ntBASIC3.88□□□□□ -1.79
LIM2P55344 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.88□□□□□ -1.79
LIM2P55344 AC016957.2-201ENST00000616998 848 ntBASIC3.88□□□□□ -1.79
LIM2P55344 AC233309.1-201ENST00000619522 751 ntBASIC3.88□□□□□ -1.79
LIM2P55344 AC095038.2-201ENST00000621464 1070 ntBASIC3.88□□□□□ -1.79
LIM2P55344 AC090506.2-201ENST00000624521 419 ntBASIC3.88□□□□□ -1.79
LIM2P55344 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LIM2P55344 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
LIM2P55344 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.88□□□□□ -1.79
LIM2P55344 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 AL512283.1-201ENST00000606756 1384 ntBASIC3.88□□□□□ -1.79
LIM2P55344 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
LIM2P55344 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIM2P55344 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIM2P55344 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
LIM2P55344 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIM2P55344 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIM2P55344 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
LIM2P55344 AL121657.1-201ENST00000327215 531 ntBASIC3.87□□□□□ -1.79
LIM2P55344 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.87□□□□□ -1.79
LIM2P55344 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIM2P55344 RPS26P8-201ENST00000393490 348 ntBASIC3.87□□□□□ -1.79
LIM2P55344 JKAMPP1-201ENST00000413804 919 ntBASIC3.87□□□□□ -1.79
LIM2P55344 LINC01347-201ENST00000417964 355 ntBASIC3.87□□□□□ -1.79
LIM2P55344 EIF2S2P3-201ENST00000428356 999 ntBASIC3.87□□□□□ -1.79
LIM2P55344 AL358472.1-201ENST00000431295 329 ntBASIC3.87□□□□□ -1.79
LIM2P55344 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.87□□□□□ -1.79
LIM2P55344 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.87□□□□□ -1.79
LIM2P55344 AL450263.2-201ENST00000439400 589 ntBASIC3.87□□□□□ -1.79
LIM2P55344 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.87□□□□□ -1.79
LIM2P55344 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.87□□□□□ -1.79
LIM2P55344 RPL7L1P1-201ENST00000448259 785 ntBASIC3.87□□□□□ -1.79
LIM2P55344 AL451050.1-201ENST00000450126 415 ntBASIC3.87□□□□□ -1.79
LIM2P55344 EIF4A1P11-201ENST00000451239 222 ntBASIC3.87□□□□□ -1.79
LIM2P55344 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.87□□□□□ -1.79
LIM2P55344 RPL38P1-201ENST00000460914 211 ntBASIC3.87□□□□□ -1.79
LIM2P55344 RN7SL385P-201ENST00000468873 276 ntBASIC3.87□□□□□ -1.79
LIM2P55344 RPL7P19-201ENST00000469948 618 ntBASIC3.87□□□□□ -1.79
LIM2P55344 RPS26P15-201ENST00000488067 348 ntBASIC3.87□□□□□ -1.79
LIM2P55344 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.87□□□□□ -1.79
LIM2P55344 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.87□□□□□ -1.79
LIM2P55344 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.87□□□□□ -1.79
LIM2P55344 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.87□□□□□ -1.79
LIM2P55344 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.87□□□□□ -1.79
LIM2P55344 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.87□□□□□ -1.79
LIM2P55344 NPM1P6-201ENST00000521088 871 ntBASIC3.87□□□□□ -1.79
LIM2P55344 CIR1P1-201ENST00000524055 1133 ntBASIC3.87□□□□□ -1.79
LIM2P55344 AP002812.4-201ENST00000532139 286 ntBASIC3.87□□□□□ -1.79
LIM2P55344 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.87□□□□□ -1.79
LIM2P55344 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIM2P55344 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.87□□□□□ -1.79
LIM2P55344 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.87□□□□□ -1.79
LIM2P55344 AC012417.1-201ENST00000582307 1039 ntBASIC3.87□□□□□ -1.79
LIM2P55344 MIR5684-201ENST00000585074 65 ntBASIC3.87□□□□□ -1.79
LIM2P55344 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms