Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK2P53671 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK2P53671 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK2P53671 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK2P53671 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK2P53671 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.3□□□□□ -1.72
LIMK2P53671 AP003117.1-201ENST00000602771 554 ntBASIC4.3□□□□□ -1.72
LIMK2P53671 BNIP3P19-201ENST00000605397 577 ntBASIC4.3□□□□□ -1.72
LIMK2P53671 AC010857.1-201ENST00000606398 594 ntBASIC4.3□□□□□ -1.72
LIMK2P53671 AC084824.5-201ENST00000612009 413 ntBASIC4.3□□□□□ -1.72
LIMK2P53671 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK2P53671 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.3□□□□□ -1.72
LIMK2P53671 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.3□□□□□ -1.72
LIMK2P53671 MIR7973-1-201ENST00000614683 76 ntBASIC4.3□□□□□ -1.72
LIMK2P53671 AL158196.1-201ENST00000616786 434 ntBASIC4.3□□□□□ -1.72
LIMK2P53671 AC022306.3-201ENST00000619930 550 ntBASIC4.3□□□□□ -1.72
LIMK2P53671 AC097372.4-201ENST00000625025 466 ntBASIC4.3□□□□□ -1.72
LIMK2P53671 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK2P53671 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LIMK2P53671 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIMK2P53671 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.29□□□□□ -1.72
LIMK2P53671 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.29□□□□□ -1.72
LIMK2P53671 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 RNA5SP175-201ENST00000364275 119 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 SNORA62.2-201ENST00000364672 152 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 RNA5SP366-201ENST00000365454 123 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 RNU6-650P-201ENST00000365658 111 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 RNA5SP104-201ENST00000410989 118 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 RPL23AP26-201ENST00000412728 464 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK2P53671 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK2P53671 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.29□□□□□ -1.72
LIMK2P53671 EIF1P3-201ENST00000423841 334 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK2P53671 RPS3AP54-201ENST00000435535 734 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK2P53671 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK2P53671 AC010469.1-201ENST00000463864 576 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 UQCRHP4-201ENST00000471686 272 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AC105137.1-201ENST00000484355 562 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 UBA52P3-201ENST00000491303 382 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AC027338.1-201ENST00000514840 825 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 SNORA31.9-201ENST00000516429 84 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 MTND1P6-201ENST00000523621 946 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 CIR1P1-201ENST00000524055 1133 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 CYCSP29-201ENST00000533731 318 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 UBTFL9-201ENST00000534504 1148 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.29□□□□□ -1.72
LIMK2P53671 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.29□□□□□ -1.72
LIMK2P53671 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK2P53671 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK2P53671 AC008638.3-201ENST00000603341 463 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 uc_338.13-201ENST00000618243 179 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AC139769.3-201ENST00000618383 175 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AL023881.1-201ENST00000621088 301 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AC008785.1-201ENST00000624475 456 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 MIR3653-201ENST00000625572 110 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.29□□□□□ -1.72
LIMK2P53671 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
LIMK2P53671 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LIMK2P53671 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.29□□□□□ -1.72
LIMK2P53671 AC097504.1-201ENST00000515103 2415 ntBASIC4.29□□□□□ -1.72
LIMK2P53671 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LIMK2P53671 AL136520.1-201ENST00000600311 1322 ntBASIC4.28□□□□□ -1.72
LIMK2P53671 EIF2AP4-201ENST00000424793 1781 ntBASIC4.28□□□□□ -1.72
LIMK2P53671 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.28□□□□□ -1.72
LIMK2P53671 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK2P53671 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.28□□□□□ -1.72
LIMK2P53671 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK2P53671 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LIMK2P53671 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK2P53671 RNA5SP388-201ENST00000362584 119 ntBASIC4.28□□□□□ -1.72
LIMK2P53671 SNORD74.4-201ENST00000364129 80 ntBASIC4.28□□□□□ -1.72
LIMK2P53671 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK2P53671 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK2P53671 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK2P53671 HMGB1P13-201ENST00000406019 642 ntBASIC4.28□□□□□ -1.72
LIMK2P53671 RN7SKP263-201ENST00000411194 309 ntBASIC4.28□□□□□ -1.72
LIMK2P53671 AC013404.1-201ENST00000413068 249 ntBASIC4.28□□□□□ -1.72
LIMK2P53671 MTCO3P4-201ENST00000419236 787 ntBASIC4.28□□□□□ -1.72
LIMK2P53671 RPL17P36-201ENST00000420302 549 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms