Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPL7P19-201ENST00000469948 618 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC103987.1-201ENST00000473394 348 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
LHX1P48742 RPS17P11-201ENST00000474297 293 ntBASIC4.52□□□□□ -1.69
LHX1P48742 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
LHX1P48742 RN7SL817P-201ENST00000480777 288 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC104164.2-201ENST00000496953 495 ntBASIC4.52□□□□□ -1.69
LHX1P48742 RPS27AP13-201ENST00000498403 237 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.52□□□□□ -1.69
LHX1P48742 RNA5SP360-201ENST00000516555 118 ntBASIC4.52□□□□□ -1.69
LHX1P48742 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.52□□□□□ -1.69
LHX1P48742 AL121594.4-201ENST00000556211 1196 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.52□□□□□ -1.69
LHX1P48742 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.52□□□□□ -1.69
LHX1P48742 AC068620.3-201ENST00000602749 560 ntBASIC4.52□□□□□ -1.69
LHX1P48742 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 AL049777.1-201ENST00000622740 518 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AP003476.1-201ENST00000623984 516 ntBASIC4.52□□□□□ -1.69
LHX1P48742 AC008013.2-202ENST00000637965 364 ntBASIC4.52□□□□□ -1.69
LHX1P48742 MIR492-201ENST00000638676 116 ntBASIC4.52□□□□□ -1.69
LHX1P48742 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 MAPK10-304ENST00000641341 3984 ntBASIC4.52□□□□□ -1.69
LHX1P48742 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LHX1P48742 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.52□□□□□ -1.69
LHX1P48742 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
LHX1P48742 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.52□□□□□ -1.69
LHX1P48742 MTND4P31-201ENST00000425607 1343 ntBASIC4.51□□□□□ -1.69
LHX1P48742 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX1P48742 AC006042.3-201ENST00000454684 1469 ntBASIC4.51□□□□□ -1.69
LHX1P48742 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX1P48742 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LHX1P48742 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX1P48742 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LHX1P48742 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
LHX1P48742 AL121657.1-201ENST00000327215 531 ntBASIC4.51□□□□□ -1.69
LHX1P48742 RN7SKP227-201ENST00000364445 330 ntBASIC4.51□□□□□ -1.69
LHX1P48742 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
LHX1P48742 AL355615.1-201ENST00000406187 641 ntBASIC4.51□□□□□ -1.69
LHX1P48742 MIR1179-201ENST00000408703 91 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AL024507.1-201ENST00000412741 274 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX1P48742 AC009237.10-201ENST00000414112 510 ntBASIC4.51□□□□□ -1.69
LHX1P48742 MTND4P11-201ENST00000417020 1058 ntBASIC4.51□□□□□ -1.69
LHX1P48742 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AC013262.1-201ENST00000426710 252 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AC073335.1-201ENST00000427776 363 ntBASIC4.51□□□□□ -1.69
LHX1P48742 FO393414.1-201ENST00000428697 1184 ntBASIC4.51□□□□□ -1.69
LHX1P48742 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX1P48742 RPL23AP46-201ENST00000438548 490 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AC114755.5-201ENST00000447760 831 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX1P48742 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX1P48742 AL096803.2-201ENST00000450032 677 ntBASIC4.51□□□□□ -1.69
LHX1P48742 RPS29P19-201ENST00000479709 171 ntBASIC4.51□□□□□ -1.69
LHX1P48742 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.51□□□□□ -1.69
LHX1P48742 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.51□□□□□ -1.69
LHX1P48742 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX1P48742 AC104115.2-201ENST00000523026 687 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.51□□□□□ -1.69
LHX1P48742 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX1P48742 AC027104.1-201ENST00000563702 681 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX1P48742 AC126365.2-201ENST00000580630 379 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX1P48742 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.51□□□□□ -1.69
LHX1P48742 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX1P48742 AC010200.2-201ENST00000605098 235 ntBASIC4.51□□□□□ -1.69
LHX1P48742 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.51□□□□□ -1.69
LHX1P48742 AC090506.2-201ENST00000624521 419 ntBASIC4.51□□□□□ -1.69
LHX1P48742 U6.107-201ENST00000637108 79 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX1P48742 AL596275.2-204ENST00000641628 552 ntBASIC4.51□□□□□ -1.69
LHX1P48742 AL596275.2-206ENST00000641957 626 ntBASIC4.51□□□□□ -1.69
LHX1P48742 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX1P48742 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LHX1P48742 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX1P48742 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LHX1P48742 NOL8P1-201ENST00000508336 3529 ntBASIC4.51□□□□□ -1.69
LHX1P48742 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX1P48742 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.5□□□□□ -1.69
LHX1P48742 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
LHX1P48742 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LHX1P48742 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LHX1P48742 RNA5SP372-201ENST00000390836 115 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX1P48742 AC004975.1-201ENST00000428733 208 ntBASIC4.5□□□□□ -1.69
LHX1P48742 RPS27AP12-201ENST00000429552 465 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AL645931.1-201ENST00000439737 410 ntBASIC4.5□□□□□ -1.69
LHX1P48742 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.5□□□□□ -1.69
LHX1P48742 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.5□□□□□ -1.69
LHX1P48742 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX1P48742 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms