Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 ZYXP1-201ENST00000617638 118 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AP001486.2-201ENST00000561652 5113 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMBP28068 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMBP28068 MIR423-201ENST00000362201 94 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMBP28068 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMBP28068 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AL022722.2-201ENST00000402519 180 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 AL034374.1-201ENST00000406329 351 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 RN7SKP263-201ENST00000411194 309 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AL159169.1-201ENST00000421119 127 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 AC115285.1-201ENST00000424879 736 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 AF228730.2-201ENST00000438784 848 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 FCF1P7-201ENST00000451185 558 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 RPS7P7-201ENST00000463499 571 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AL672167.3-201ENST00000465951 960 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 LARP1BP1-201ENST00000506036 1359 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 RN7SKP21-201ENST00000516503 220 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 NARSP2-201ENST00000518524 679 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AC025884.1-201ENST00000556034 378 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AC025627.2-201ENST00000576220 160 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 MIR5684-201ENST00000585074 65 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 PSMA6P4-201ENST00000603247 718 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 AL591424.2-201ENST00000617023 128 ntBASIC3.06□□□□□ -1.92
HLA-DMBP28068 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMBP28068 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 HSPA8P1-201ENST00000425843 1833 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DMBP28068 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DMBP28068 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DMBP28068 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 MTCYBP7-201ENST00000419540 1134 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 RCC2P2-201ENST00000422174 918 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AL138785.1-201ENST00000425821 331 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AL356535.1-201ENST00000440335 398 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 ANP32BP2-201ENST00000454525 545 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 PPIAP15-201ENST00000479662 484 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC069499.1-201ENST00000489433 509 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DMBP28068 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC109458.1-201ENST00000508858 316 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC026726.1-201ENST00000512859 601 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC099522.1-202ENST00000514718 367 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 AGGF1P6-201ENST00000569213 976 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.05□□□□□ -1.92
HLA-DMBP28068 ABI1P1-201ENST00000603375 1120 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AL591034.3-201ENST00000605511 685 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC012213.4-201ENST00000606457 354 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 MIR8059-201ENST00000620427 81 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC090506.2-201ENST00000624521 419 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 AC009950.2-201ENST00000636548 183 ntBASIC3.05□□□□□ -1.92
HLA-DMBP28068 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DMBP28068 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms