Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RPL23AP26-201ENST00000412728 464 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.96□□□□□ -1.78
CLDN9O95484 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN9O95484 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 RPL18P10-201ENST00000425606 538 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 BX119904.1-201ENST00000432026 348 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN9O95484 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 TPTE2P3-201ENST00000441562 1189 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN9O95484 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN9O95484 RN7SL271P-201ENST00000487601 295 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 OR9N1P-202ENST00000494289 481 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN9O95484 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 AC108475.1-201ENST00000507880 950 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN9O95484 HAUS1P3-201ENST00000523909 662 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN9O95484 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN9O95484 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN9O95484 AC011477.5-201ENST00000586571 259 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 NF1P5-201ENST00000588287 448 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN9O95484 ZNF92P3-201ENST00000596594 954 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 AL020997.2-201ENST00000602607 184 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 AL451044.1-201ENST00000604867 238 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN9O95484 AC114781.5-201ENST00000615297 108 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 AC011944.2-201ENST00000624440 683 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 AL356121.2-201ENST00000624715 780 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 AL773545.4-201ENST00000637262 310 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 AL513478.4-201ENST00000641636 310 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 OR52H1-202ENST00000641796 1061 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 AC009501.3-201ENST00000605001 1352 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 AC006042.3-201ENST00000454684 1469 ntBASIC3.96□□□□□ -1.78
CLDN9O95484 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CLDN9O95484 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CLDN9O95484 AL353743.4-201ENST00000422653 1547 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CLDN9O95484 AL592437.2-201ENST00000421655 2434 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN9O95484 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN9O95484 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN9O95484 MIR383-201ENST00000362257 73 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 SNORD35B-201ENST00000363660 87 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN9O95484 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN9O95484 AL358472.1-201ENST00000431295 329 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN9O95484 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN9O95484 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN9O95484 RPL7P31-201ENST00000450192 724 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 AC139783.2-201ENST00000504847 1145 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 KRT19P6-201ENST00000510983 209 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 AC034205.1-201ENST00000520621 638 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN9O95484 AC009643.1-201ENST00000532030 391 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN9O95484 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.95□□□□□ -1.78
CLDN9O95484 AL109741.3-201ENST00000561748 592 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN9O95484 IPO5P1-202ENST00000600039 287 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 SUMO2P14-201ENST00000604488 293 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 AC114878.2-201ENST00000604863 1251 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 AC010857.1-201ENST00000606398 594 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 AC128687.2-201ENST00000609657 566 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN9O95484 RMST_9.1-201ENST00000619945 193 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 AL162233.1-201ENST00000620014 944 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 MIR3653-201ENST00000625572 110 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CLDN9O95484 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN9O95484 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN9O95484 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN9O95484 USP9YP4-201ENST00000424401 1745 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 GTF2H2B-203ENST00000508065 1432 ntBASIC3.95□□□□□ -1.78
CLDN9O95484 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 LINC02471-203ENST00000641941 4752 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN9O95484 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN9O95484 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN9O95484 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN9O95484 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN9O95484 SNORA60-201ENST00000362396 134 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 AL592293.2-201ENST00000422292 996 ntBASIC3.94□□□□□ -1.78
CLDN9O95484 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN9O95484 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms