Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHOX2O60902 SNORA70F-201ENST00000384142 135 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 RNU6-398P-201ENST00000384143 109 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 SNORA57.1-201ENST00000391227 145 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 AL049693.1-201ENST00000402760 611 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 SNORA57.3-201ENST00000411095 141 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.96□□□□□ -1.78
SHOX2O60902 LIPT1P1-201ENST00000415870 1186 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 TMSB10P2-201ENST00000416049 131 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.96□□□□□ -1.78
SHOX2O60902 ELOCP10-201ENST00000440624 327 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.96□□□□□ -1.78
SHOX2O60902 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.96□□□□□ -1.78
SHOX2O60902 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.96□□□□□ -1.78
SHOX2O60902 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.96□□□□□ -1.78
SHOX2O60902 AC026979.1-201ENST00000492525 396 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 RPL29P14-201ENST00000495837 428 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 IGLVIV-65-201ENST00000517313 360 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.96□□□□□ -1.78
SHOX2O60902 VTA1P2-201ENST00000520205 911 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.96□□□□□ -1.78
SHOX2O60902 MIR5096-201ENST00000583713 70 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.96□□□□□ -1.78
SHOX2O60902 ELOCP34-201ENST00000604436 327 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 AC007620.3-201ENST00000608131 497 ntBASIC3.96□□□□□ -1.78
SHOX2O60902 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.96□□□□□ -1.78
SHOX2O60902 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SHOX2O60902 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
SHOX2O60902 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.96□□□□□ -1.78
SHOX2O60902 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SHOX2O60902 MFSD8-220ENST00000641243 1422 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
SHOX2O60902 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
SHOX2O60902 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.95□□□□□ -1.78
SHOX2O60902 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHOX2O60902 EXOC5P1-201ENST00000510543 1969 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHOX2O60902 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHOX2O60902 SNORD35B-201ENST00000363660 87 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SHOX2O60902 SNORA11.1-201ENST00000408133 129 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 RNA5SP44-201ENST00000410446 133 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 RPL23AP26-201ENST00000412728 464 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 MFSD13B-201ENST00000420133 1290 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 RPEP3-201ENST00000425462 676 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.95□□□□□ -1.78
SHOX2O60902 AC068287.1-201ENST00000430283 295 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 RPL6P9-201ENST00000466502 859 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AC113398.2-201ENST00000507630 558 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHOX2O60902 RNU6-319P-201ENST00000516025 108 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AP001636.2-201ENST00000525517 696 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.95□□□□□ -1.78
SHOX2O60902 AC011602.1-201ENST00000546484 331 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.95□□□□□ -1.78
SHOX2O60902 AC022655.2-201ENST00000577280 318 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 MIR3160-1-201ENST00000577972 85 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 MIR4270-201ENST00000581799 70 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AC022146.1-201ENST00000595307 847 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AC113403.1-201ENST00000604910 193 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AC034236.3-201ENST00000605999 461 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AC019193.2-201ENST00000610012 634 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AL161616.1-201ENST00000611867 286 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 FAM27D1-201ENST00000612308 341 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 AC068724.3-201ENST00000625906 87 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
SHOX2O60902 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHOX2O60902 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
SHOX2O60902 RAD17P1-201ENST00000418130 2042 ntBASIC3.95□□□□□ -1.78
SHOX2O60902 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SHOX2O60902 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHOX2O60902 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHOX2O60902 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHOX2O60902 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SHOX2O60902 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SHOX2O60902 AL049555.1-201ENST00000562834 1933 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.94□□□□□ -1.78
SHOX2O60902 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.94□□□□□ -1.78
SHOX2O60902 RPS26P8-201ENST00000393490 348 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 RNA5SP36-201ENST00000410197 133 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 RNU6-603P-201ENST00000411403 107 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.94□□□□□ -1.78
SHOX2O60902 RPS12P23-201ENST00000419579 400 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AC006065.1-201ENST00000422539 802 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 RPL18P10-201ENST00000425606 538 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AC004975.1-201ENST00000428733 208 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 RPL23AP46-201ENST00000438548 490 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.94□□□□□ -1.78
SHOX2O60902 IFNWP4-201ENST00000453148 294 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 RNA5SP246-201ENST00000458909 119 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.94□□□□□ -1.78
SHOX2O60902 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.94□□□□□ -1.78
SHOX2O60902 RPL7P47-201ENST00000497299 556 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.94□□□□□ -1.78
SHOX2O60902 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.94□□□□□ -1.78
SHOX2O60902 AC110768.1-201ENST00000509222 400 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.94□□□□□ -1.78
SHOX2O60902 AC008802.1-201ENST00000519121 791 ntBASIC3.94□□□□□ -1.78
SHOX2O60902 NDUFB9P3-201ENST00000521269 501 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms