Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 XKRY2-202ENST00000623874 1581 ntBASIC6.56□□□□□ -1.36
CUX2O14529 XKRY-202ENST00000624960 1581 ntBASIC6.56□□□□□ -1.36
CUX2O14529 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
CUX2O14529 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.56□□□□□ -1.36
CUX2O14529 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUX2O14529 PGBD4P8-201ENST00000412993 562 ntBASIC6.56□□□□□ -1.36
CUX2O14529 AC005008.1-201ENST00000456151 612 ntBASIC6.56□□□□□ -1.36
CUX2O14529 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.56□□□□□ -1.36
CUX2O14529 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.56□□□□□ -1.36
CUX2O14529 AC021146.3-201ENST00000511911 260 ntBASIC6.56□□□□□ -1.36
CUX2O14529 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.56□□□□□ -1.36
CUX2O14529 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC6.56□□□□□ -1.36
CUX2O14529 AC093524.1-201ENST00000564266 1094 ntBASIC6.56□□□□□ -1.36
CUX2O14529 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC6.56□□□□□ -1.36
CUX2O14529 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.56□□□□□ -1.36
CUX2O14529 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.56□□□□□ -1.36
CUX2O14529 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CUX2O14529 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
CUX2O14529 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CUX2O14529 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUX2O14529 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CUX2O14529 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CUX2O14529 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CUX2O14529 AL024507.1-201ENST00000412741 274 ntBASIC6.55□□□□□ -1.36
CUX2O14529 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.55□□□□□ -1.36
CUX2O14529 ATP5JP1-201ENST00000431631 322 ntBASIC6.55□□□□□ -1.36
CUX2O14529 AC025750.2-201ENST00000442609 450 ntBASIC6.55□□□□□ -1.36
CUX2O14529 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.55□□□□□ -1.36
CUX2O14529 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.55□□□□□ -1.36
CUX2O14529 PCA3_2.1-201ENST00000612507 409 ntBASIC6.55□□□□□ -1.36
CUX2O14529 BMS1P21-201ENST00000634565 365 ntBASIC6.55□□□□□ -1.36
CUX2O14529 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC6.55□□□□□ -1.36
CUX2O14529 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CUX2O14529 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.54□□□□□ -1.36
CUX2O14529 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUX2O14529 MIR199A2-201ENST00000385289 110 ntBASIC6.54□□□□□ -1.36
CUX2O14529 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.54□□□□□ -1.36
CUX2O14529 AC107083.1-201ENST00000439643 279 ntBASIC6.54□□□□□ -1.36
CUX2O14529 FABP3P2-201ENST00000453169 399 ntBASIC6.54□□□□□ -1.36
CUX2O14529 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.54□□□□□ -1.36
CUX2O14529 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.54□□□□□ -1.36
CUX2O14529 snoU109.6-201ENST00000516831 118 ntBASIC6.54□□□□□ -1.36
CUX2O14529 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.54□□□□□ -1.36
CUX2O14529 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.54□□□□□ -1.36
CUX2O14529 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUX2O14529 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUX2O14529 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CUX2O14529 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUX2O14529 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CUX2O14529 RPL7P59-201ENST00000447700 943 ntBASIC6.53□□□□□ -1.36
CUX2O14529 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.53□□□□□ -1.36
CUX2O14529 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUX2O14529 AC022968.1-201ENST00000567372 442 ntBASIC6.53□□□□□ -1.36
CUX2O14529 AC012417.1-201ENST00000582307 1039 ntBASIC6.53□□□□□ -1.36
CUX2O14529 MIR7106-201ENST00000612419 65 ntBASIC6.53□□□□□ -1.36
CUX2O14529 AC023509.5-201ENST00000617434 807 ntBASIC6.53□□□□□ -1.36
CUX2O14529 MIR7154-201ENST00000620673 73 ntBASIC6.53□□□□□ -1.36
CUX2O14529 AC138907.10-201ENST00000623708 983 ntBASIC6.53□□□□□ -1.36
CUX2O14529 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.53□□□□□ -1.36
CUX2O14529 AL034403.1-201ENST00000399414 885 ntBASIC6.53□□□□□ -1.36
CUX2O14529 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUX2O14529 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUX2O14529 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUX2O14529 RPL23AP89-201ENST00000439324 255 ntBASIC6.53□□□□□ -1.36
CUX2O14529 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUX2O14529 AC073522.1-201ENST00000483312 377 ntBASIC6.53□□□□□ -1.36
CUX2O14529 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.53□□□□□ -1.36
CUX2O14529 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.53□□□□□ -1.36
CUX2O14529 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.53□□□□□ -1.36
CUX2O14529 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC6.53□□□□□ -1.36
CUX2O14529 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.53□□□□□ -1.36
CUX2O14529 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.36
CUX2O14529 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
CUX2O14529 AC125336.1-201ENST00000508893 2827 ntBASIC6.52□□□□□ -1.37
CUX2O14529 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUX2O14529 OR2A20P-203ENST00000498397 1268 ntBASIC6.52□□□□□ -1.37
CUX2O14529 AC008694.2-201ENST00000517591 306 ntBASIC6.52□□□□□ -1.37
CUX2O14529 RANP9-201ENST00000519957 271 ntBASIC6.52□□□□□ -1.37
CUX2O14529 AC011611.1-201ENST00000552179 197 ntBASIC6.52□□□□□ -1.37
CUX2O14529 AC007599.1-201ENST00000568688 1174 ntBASIC6.52□□□□□ -1.37
CUX2O14529 MIR5186-201ENST00000577504 120 ntBASIC6.52□□□□□ -1.37
CUX2O14529 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.52□□□□□ -1.37
CUX2O14529 AC026979.4-201ENST00000606555 645 ntBASIC6.52□□□□□ -1.37
CUX2O14529 MIR7702-201ENST00000621931 59 ntBASIC6.52□□□□□ -1.37
CUX2O14529 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUX2O14529 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CUX2O14529 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CUX2O14529 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CUX2O14529 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CUX2O14529 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUX2O14529 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUX2O14529 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
CUX2O14529 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CUX2O14529 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CUX2O14529 SNORD9-201ENST00000362566 104 ntBASIC6.51□□□□□ -1.37
CUX2O14529 RNA5SP146-201ENST00000410743 123 ntBASIC6.51□□□□□ -1.37
CUX2O14529 RPL21P110-201ENST00000433345 446 ntBASIC6.51□□□□□ -1.37
CUX2O14529 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.51□□□□□ -1.37
CUX2O14529 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.51□□□□□ -1.37
CUX2O14529 RPL21P11-201ENST00000461458 483 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms