Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL034351.1-201ENST00000605288 668 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.19□□□□□ -1.9
SDCBPO00560 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SDCBPO00560 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.19□□□□□ -1.9
SDCBPO00560 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SDCBPO00560 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SDCBPO00560 TNPO1P3-201ENST00000436471 2662 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 CEP170P1-201ENST00000502249 4587 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SDCBPO00560 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SDCBPO00560 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.18□□□□□ -1.9
SDCBPO00560 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDCBPO00560 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC007342.7-201ENST00000624610 2337 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDCBPO00560 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SDCBPO00560 SPRR2C-201ENST00000290702 219 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 RNA5SP443-201ENST00000363083 132 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.18□□□□□ -1.9
SDCBPO00560 RNA5SP317-201ENST00000410176 116 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 RNA5SP311-201ENST00000411290 116 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AC114814.2-201ENST00000419195 485 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 COX6CP17-201ENST00000421389 185 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AC099336.2-201ENST00000422457 254 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AC002075.2-201ENST00000425207 252 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.18□□□□□ -1.9
SDCBPO00560 MOB1AP1-201ENST00000430903 535 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.18□□□□□ -1.9
SDCBPO00560 AL138787.1-202ENST00000437804 898 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 SNORA71B-202ENST00000439232 272 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC006326.1-201ENST00000445465 787 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 TPT1P12-201ENST00000448968 492 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 RPL5P32-201ENST00000454085 879 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AC099560.2-201ENST00000457554 255 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 PPIAP21-201ENST00000464473 501 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 RPS4XP15-201ENST00000489210 795 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.18□□□□□ -1.9
SDCBPO00560 RAC1P2-201ENST00000511164 579 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 MTCO1P35-201ENST00000515270 228 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 RNA5SP315-201ENST00000516340 116 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 RNA5SP312-201ENST00000517068 116 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SDCBPO00560 OR5AP1P-201ENST00000529730 940 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.18□□□□□ -1.9
SDCBPO00560 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC007424.1-203ENST00000554613 687 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC009101.1-201ENST00000568135 242 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AGGF1P6-201ENST00000569213 976 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.18□□□□□ -1.9
SDCBPO00560 AC015726.1-201ENST00000602353 681 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 AL354760.1-201ENST00000608357 643 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 MIR378J-201ENST00000611988 109 ntBASIC3.18□□□□□ -1.9
SDCBPO00560 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.18□□□□□ -1.9
SDCBPO00560 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.18□□□□□ -1.9
SDCBPO00560 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SDCBPO00560 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SDCBPO00560 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SDCBPO00560 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SDCBPO00560 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SDCBPO00560 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SDCBPO00560 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 RNU6-1331P-201ENST00000363658 106 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 MIR199A2-201ENST00000385289 110 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SDCBPO00560 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.17□□□□□ -1.9
SDCBPO00560 AC127526.1-201ENST00000417526 366 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.17□□□□□ -1.9
SDCBPO00560 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.17□□□□□ -1.9
SDCBPO00560 HIGD1AP12-201ENST00000427832 281 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.17□□□□□ -1.9
SDCBPO00560 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.17□□□□□ -1.9
SDCBPO00560 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.17□□□□□ -1.9
SDCBPO00560 CASP3P1-201ENST00000446037 609 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 RPS29P31-201ENST00000446147 164 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 EXTL2P1-201ENST00000446218 416 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.17□□□□□ -1.9
SDCBPO00560 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.17□□□□□ -1.9
SDCBPO00560 AC108941.1-201ENST00000502853 530 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SDCBPO00560 NDUFA5P2-201ENST00000519723 344 ntBASIC3.17□□□□□ -1.9
SDCBPO00560 IGKV2D-10-201ENST00000520194 281 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms