Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 OR7A8P-201ENST00000595427 913 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 RN7SL853P-201ENST00000617250 223 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 IPO8P1-201ENST00000455509 3109 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 AL512649.1-201ENST00000428997 581 ntBASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 RPL32P34-201ENST00000486380 400 ntBASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 AC006960.3-201ENST00000561845 705 ntBASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 AC233702.9-201ENST00000581528 203 ntBASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 AC010680.3-201ENST00000604215 520 ntBASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 AC244258.1-201ENST00000637553 1071 ntBASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 AL022322.2-201ENST00000624072 20397 ntBASIC5.59□□□□□ -1.51
SHANK2Q9UPX8 AC011266.1-201ENST00000624119 3569 ntBASIC5.59□□□□□ -1.52
SHANK2Q9UPX8 RN7SKP199-201ENST00000410325 305 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AC007823.1-201ENST00000569932 1566 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AL353600.1-201ENST00000608148 251 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 RNU1-33P-201ENST00000364249 162 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 RNA5SP424-201ENST00000390988 115 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 ATP5JP1-201ENST00000431631 322 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AL591503.2-201ENST00000442314 1005 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 SNORA70.17-201ENST00000516449 133 ntBASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.58□□□□□ -1.52
SHANK2Q9UPX8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AC234772.1-201ENST00000377927 937 ntBASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 RPL7P44-201ENST00000424827 742 ntBASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 RBMY2UP-201ENST00000453474 324 ntBASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 RPL7P23-201ENST00000493874 747 ntBASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 AC012493.2-201ENST00000595083 291 ntBASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 KC877982.1-201ENST00000602313 470 ntBASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHANK2Q9UPX8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 AL442128.2-201ENST00000620246 1824 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 GNG5P1-201ENST00000255500 204 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 RNA5SP120-201ENST00000410900 112 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 USP9YP36-201ENST00000424581 829 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 USP9YP31-201ENST00000431405 881 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 ELOCP8-201ENST00000439309 332 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 ELOCP15-201ENST00000442090 332 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms