Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 OR13Z1P-201ENST00000416141 834 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AL356095.1-201ENST00000417217 199 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 MRPL50P1-201ENST00000431951 384 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 OR4C10P-201ENST00000434991 931 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 HLA-N-201ENST00000437516 135 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 RAD23BP3-201ENST00000454157 1152 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 APOOP2-201ENST00000461561 539 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC006511.1-201ENST00000470614 315 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 RPS26P28-201ENST00000470806 348 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 KRT19P6-201ENST00000510983 209 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AL121594.4-201ENST00000556211 1196 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC079148.1-201ENST00000565944 819 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AL031666.3-201ENST00000609320 1006 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC023043.4-201ENST00000612081 449 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC123768.4-201ENST00000616244 701 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 U6.48-201ENST00000618523 106 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 AC068831.8-201ENST00000620171 435 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.19□□□□□ -1.74
LHX3Q9UBR4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LHX3Q9UBR4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 ERCC6-202ENST00000374127 1782 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 OR11H4-201ENST00000315409 1082 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 RNU2-72P-201ENST00000411175 163 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 TPT1P2-201ENST00000413105 503 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AC019070.1-201ENST00000415008 1024 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 RPS27AP12-201ENST00000429552 465 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AC114755.5-201ENST00000447760 831 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AC017099.1-201ENST00000448261 1028 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 RPL36AP13-201ENST00000457490 317 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 RPS7P7-201ENST00000463499 571 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 PPBPP1-201ENST00000510807 373 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 MTCO1P35-201ENST00000515270 228 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 MTND6P33-201ENST00000571794 183 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AL121834.1-201ENST00000572284 509 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 MIR432-201ENST00000606207 94 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AC009318.3-201ENST00000616916 503 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 MIR7702-201ENST00000621931 59 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 CR392039.4-201ENST00000624968 501 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 AC055839.1-201ENST00000634467 498 ntBASIC4.18□□□□□ -1.74
LHX3Q9UBR4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LHX3Q9UBR4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 RNU6-98P-201ENST00000384173 107 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 ENSAP1-201ENST00000392855 326 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 ATP5F1P2-201ENST00000398143 760 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 RNA5SP146-201ENST00000410743 123 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 UBE2V1P11-201ENST00000411559 285 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms