Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RPL32P3-201ENST00000359025 275 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RN7SKP44-201ENST00000363602 316 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP317-201ENST00000410176 116 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP311-201ENST00000411290 116 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RPL7P28-201ENST00000437739 740 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC114755.5-201ENST00000447760 831 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RPL7P31-201ENST00000450192 724 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 HMGB3P21-201ENST00000452483 547 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AL133477.1-201ENST00000457472 514 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RN7SL93P-201ENST00000463035 293 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC010307.1-201ENST00000467206 836 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 S100A11P1-201ENST00000477525 312 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC084198.1-201ENST00000477747 402 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RPS4XP15-201ENST00000489210 795 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 TRBV12-2-201ENST00000489763 344 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP315-201ENST00000516340 116 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP312-201ENST00000517068 116 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC092747.2-201ENST00000545069 983 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 MIR6758-201ENST00000620653 63 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC091905.1-201ENST00000624400 311 ntBASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS29Q9UBQ0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC083899.2-201ENST00000423285 1376 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 EIF2S2P4-201ENST00000461070 984 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC105918.1-201ENST00000474399 838 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 HAUS1P1-201ENST00000505275 832 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 RNA5SP164-201ENST00000516533 110 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 RNU6-347P-201ENST00000516658 105 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 NPM1P52-201ENST00000518264 846 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC120057.2-201ENST00000571520 271 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 MIR4716-201ENST00000579628 84 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC010680.3-201ENST00000604215 520 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC016252.1-201ENST00000609721 474 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 MIR6500-201ENST00000622700 86 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AC022893.2-201ENST00000564832 3296 ntBASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS29Q9UBQ0 AL031985.3-201ENST00000565390 2449 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 RNU6-304P-201ENST00000364855 107 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 SNORA62-201ENST00000365493 153 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 RNU6-225P-201ENST00000384613 103 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 ATP5F1P4-201ENST00000397288 746 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 ZNF602P-201ENST00000405929 924 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 HSPE1P8-201ENST00000406997 288 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AC010740.1-201ENST00000417035 684 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms