Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 OR11H4-201ENST00000315409 1082 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 IGKV7-3-201ENST00000357453 298 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 MIR383-201ENST00000362257 73 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 RNU11-4P-201ENST00000391149 133 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 CYB5AP4-201ENST00000396692 399 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 ATP5F1P4-201ENST00000397288 746 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 BTF3P9-201ENST00000418784 283 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AJ239321.1-201ENST00000424255 564 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 HIGD1AP4-201ENST00000430194 280 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC092809.1-201ENST00000441469 474 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 RPS11P1-201ENST00000451072 473 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 RN7SL610P-201ENST00000463845 291 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 FTH1P9-201ENST00000513251 355 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC005798.1-201ENST00000513715 387 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC008083.2-201ENST00000546707 476 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC137768.1-201ENST00000549998 553 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC141257.3-201ENST00000572906 215 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC015911.5-201ENST00000587076 451 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC006116.5-201ENST00000591936 559 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC019193.2-201ENST00000610012 634 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 MIR6868-201ENST00000611215 58 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC123768.4-201ENST00000616244 701 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC116563.2-201ENST00000624751 535 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AC010300.1-201ENST00000600671 5134 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 MAPK10-373ENST00000641983 6772 ntBASIC3.73□□□□□ -1.81
VAPAQ9P0L0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
VAPAQ9P0L0 EXOC5P1-201ENST00000510543 1969 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 MTCO1P14-201ENST00000441695 1559 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 RNU4-39P-201ENST00000362455 127 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 RNU6-618P-201ENST00000363518 112 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 U3.22-201ENST00000391120 215 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 GSTA12P-201ENST00000402398 508 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 RPL37P18-201ENST00000411602 243 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 RPL23AP26-201ENST00000412728 464 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC013404.1-201ENST00000413068 249 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 TPT1P2-201ENST00000413105 503 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 OR5BE1P-201ENST00000425977 939 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 SNRPGP5-201ENST00000456003 220 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 RPL23AP12-201ENST00000467573 473 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 RPS27AP13-201ENST00000498403 237 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC021146.7-201ENST00000509604 775 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 RNU6-1308P-201ENST00000516817 103 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC090877.1-201ENST00000561418 344 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AL109741.3-201ENST00000561748 592 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC011477.5-201ENST00000586571 259 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AL356218.2-201ENST00000605264 187 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC114781.5-201ENST00000615297 108 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AL121890.3-201ENST00000618494 516 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms