Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC022022.1-201ENST00000430304 178 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AL035246.1-201ENST00000433554 1255 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 RPL12P46-201ENST00000436610 195 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 RANP8-201ENST00000444720 713 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AL162388.1-201ENST00000450912 352 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 CYCSP53-201ENST00000455540 265 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC037198.2-201ENST00000478845 733 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 RPS3AP6-201ENST00000484430 795 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 RN7SL271P-201ENST00000487601 295 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 SLC25A15P5-201ENST00000508033 253 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC147055.1-201ENST00000509261 750 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 SCARNA14-201ENST00000516903 136 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 CYCSP30-201ENST00000546447 172 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC090953.1-201ENST00000604305 1092 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC138473.1-201ENST00000605717 526 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC012442.3-202ENST00000636742 206 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 OR8B1P-202ENST00000641132 1178 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC110792.3-201ENST00000595906 1614 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 RNA5SP97-201ENST00000365006 84 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 U1.1-201ENST00000384101 164 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 U8.11-201ENST00000384699 133 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 U8.12-201ENST00000384701 133 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 SNORA3C-201ENST00000408792 125 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 OR4F13P-201ENST00000428478 931 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 MTND2P2-201ENST00000434633 945 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 NOTCH2P1-201ENST00000443481 624 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AL133547.1-201ENST00000448546 220 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 U8.18-201ENST00000459285 133 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 HMGN1P8-201ENST00000463578 288 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 OR52A4P-203ENST00000498233 1014 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 NPM1P47-201ENST00000560843 856 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 HNRNPCP4-201ENST00000571636 900 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AC112230.1-201ENST00000604342 547 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AL590410.1-201ENST00000617925 333 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 CR392039.5-201ENST00000623201 510 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AF001550.2-201ENST00000636643 217 ntBASIC4.24□□□□□ -1.73
NXF3Q9H4D5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NXF3Q9H4D5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 HSPD1P16-201ENST00000402302 394 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 AC244453.4-201ENST00000419150 388 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 MTCO1P54-201ENST00000430139 712 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 Z74696.2-201ENST00000436514 498 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 RPS20P21-201ENST00000466859 343 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 SEPT7P6-201ENST00000469999 1143 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 MTND3P6-201ENST00000485242 339 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 AC117525.1-201ENST00000515228 503 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 MYL12AP1-201ENST00000518490 515 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 AC109635.6-201ENST00000525487 1113 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 OR8X1P-201ENST00000534542 869 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 AL049874.4-201ENST00000557593 255 ntBASIC4.23□□□□□ -1.73
NXF3Q9H4D5 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NXF3Q9H4D5 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms