Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RPS29P14-201ENST00000431518 171 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL389925.1-201ENST00000432257 728 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 RPL22P17-201ENST00000438729 315 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL359955.2-201ENST00000445380 353 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 RPL23AP20-201ENST00000447965 421 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 Z82190.1-201ENST00000454534 490 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC104164.1-201ENST00000460282 590 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC096741.1-201ENST00000472250 846 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL122020.1-201ENST00000472287 459 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 TRBV8-2-201ENST00000475637 270 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 RPL23AP40-201ENST00000487630 390 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC026427.2-201ENST00000506228 536 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 NPM1P21-201ENST00000513394 762 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL845331.3-202ENST00000562856 261 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC092121.1-201ENST00000569452 202 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL163952.1-202ENST00000569625 600 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC007151.1-201ENST00000572774 483 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL355375.2-201ENST00000574825 175 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC018638.8-201ENST00000588755 281 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC006504.6-201ENST00000590142 199 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC022916.3-201ENST00000592961 742 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC093788.1-201ENST00000609356 927 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 MIR6809-201ENST00000612189 116 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AL021918.2-201ENST00000613415 194 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC090527.3-201ENST00000619041 548 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC091905.1-201ENST00000624400 311 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC005618.4-201ENST00000625053 554 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AC123769.1-201ENST00000530992 3192 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 MTCO1P14-201ENST00000441695 1559 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 AF287957.1-201ENST00000607368 1595 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 DBF4P1-201ENST00000412976 1892 ntBASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSBP3Q9BWW4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 Y_RNA.67-201ENST00000362870 100 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 RNU6-809P-201ENST00000384461 107 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC104297.1-201ENST00000393779 870 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC016739.1-201ENST00000405359 345 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 RN7SKP151-201ENST00000410230 316 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC211486.3-201ENST00000412694 621 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC007562.1-201ENST00000421819 517 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 DPY19L1P2-201ENST00000426647 915 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 ISCA1P6-201ENST00000427740 390 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC073335.1-201ENST00000427776 363 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC023274.2-201ENST00000445264 521 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 RPL31P44-201ENST00000447680 377 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC079448.1-201ENST00000449377 373 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC016724.1-201ENST00000453215 421 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 GEMIN2P1-201ENST00000454246 752 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC233279.1-201ENST00000455300 423 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC124945.1-201ENST00000485133 188 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC073610.1-201ENST00000489971 396 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC114781.3-201ENST00000512083 142 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 SNORA19.2-201ENST00000516013 114 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 RNU6-1261P-201ENST00000517194 104 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 IGHV3-63-201ENST00000518422 341 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC105029.1-201ENST00000520250 669 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 BRD9P1-201ENST00000529855 560 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 AC093012.1-202ENST00000549403 582 ntBASIC4.97□□□□□ -1.61
SSBP3Q9BWW4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms