Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AP004247.3-201ENST00000608682 624 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC004908.3-201ENST00000610248 625 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC019206.1-201ENST00000621938 425 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC079416.3-201ENST00000624479 549 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AL353743.4-201ENST00000422653 1547 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC099654.2-201ENST00000433031 1980 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AL034370.1-201ENST00000397254 1590 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AL512646.1-201ENST00000269395 1077 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 SNORA56-201ENST00000383966 129 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 MTND4P13-201ENST00000402078 1023 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 NCSTNP1-201ENST00000406229 144 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AL008987.1-201ENST00000415528 237 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 RPL26P29-201ENST00000415623 438 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC009302.1-201ENST00000417147 390 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 GTF2IP23-201ENST00000423746 351 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 RPL21P43-201ENST00000425440 472 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 RPS26P40-201ENST00000435209 294 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 TMX2P1-201ENST00000436507 708 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 RPL7P11-201ENST00000437586 658 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC079776.3-201ENST00000450665 370 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 RPS27P23-201ENST00000487608 251 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 RPS23P1-201ENST00000491662 432 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC008494.2-201ENST00000514544 370 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 OR5D15P-201ENST00000531671 942 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC097505.1-201ENST00000610199 565 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 MIR8069-1-201ENST00000616627 86 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AL022401.1-201ENST00000619498 108 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC091304.6-201ENST00000619761 202 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC022509.4-201ENST00000621404 572 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 MIR8069-2-201ENST00000621412 86 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AP001005.3-201ENST00000622049 129 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 AC112694.2-201ENST00000623697 768 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 MTND2P41-201ENST00000637599 773 ntBASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CHMP4CQ96CF2 MAPK10-263ENST00000641052 4307 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 RN7SKP149-201ENST00000363008 344 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 Y_RNA.465-201ENST00000384293 102 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AL357515.1-201ENST00000402967 542 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AP000580.1-201ENST00000404439 358 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC007435.1-201ENST00000421086 415 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC099336.2-201ENST00000422457 254 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC099560.2-201ENST00000457554 255 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 RPL23AP56-201ENST00000460778 453 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AL591473.1-201ENST00000464297 313 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC092324.1-201ENST00000468671 324 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC011979.1-201ENST00000472300 483 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 VPS26AP1-201ENST00000483197 979 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC008885.2-201ENST00000509506 930 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 RNA5SP392-201ENST00000516905 112 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 OR4A2P-201ENST00000527276 913 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 OR4C2P-201ENST00000530855 1064 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AC091488.1-201ENST00000604239 660 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AL390816.3-201ENST00000604527 1066 ntBASIC5.8□□□□□ -1.48
CHMP4CQ96CF2 AP003973.1-201ENST00000604639 691 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms