Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 RPL21P43-201ENST00000425440 472 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AL593851.1-201ENST00000426171 157 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 ETF1P3-201ENST00000430422 1160 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 MTND1P32-201ENST00000433043 938 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 MTCO2P16-201ENST00000436962 677 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 TAF9P1-201ENST00000445421 515 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AL050341.1-201ENST00000447743 313 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 HIGD1AP8-201ENST00000453927 274 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 TAF9P2-201ENST00000454958 515 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 RPS20P4-201ENST00000461659 355 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC092754.2-201ENST00000463506 460 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC093270.2-201ENST00000486157 792 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 RPL32P9-201ENST00000487963 407 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC080014.1-201ENST00000496877 1201 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC119751.1-201ENST00000513357 765 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 RNU2-30P-201ENST00000516209 141 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 RNA5SP464-201ENST00000516251 108 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 SNORA31.13-201ENST00000516624 135 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AL391156.1-201ENST00000554965 554 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC012213.3-201ENST00000577199 777 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC022662.1-201ENST00000580252 331 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 MIR3667-201ENST00000581025 74 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 VN1R83P-201ENST00000595685 445 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AP000811.1-201ENST00000603803 651 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AL391358.1-201ENST00000605342 190 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC104073.3-201ENST00000610942 955 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC073530.2-201ENST00000623987 261 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC084035.1-201ENST00000634543 607 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 MTND4P26-201ENST00000415971 1359 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC135352.1-201ENST00000506173 1418 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 MAPK10-303ENST00000641324 3959 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC007342.7-201ENST00000624610 2337 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 Y_RNA.77-201ENST00000362962 107 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AL672167.2-201ENST00000377164 879 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 RPS3AP26-201ENST00000398259 784 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 SNORA11B-201ENST00000408175 129 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AL445213.1-201ENST00000412589 747 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC140479.3-201ENST00000418944 1126 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 MTND4P20-201ENST00000424125 869 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 GTF2IP2-201ENST00000424290 697 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 RAC1P8-201ENST00000427086 527 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 RPL36AP15-201ENST00000444514 266 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 H2AFZP5-201ENST00000446960 382 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC097262.1-201ENST00000452559 548 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 RPS3AP41-201ENST00000462701 778 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 IGLV2-34-201ENST00000490007 283 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 RPL36AP41-201ENST00000493820 306 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC107401.1-201ENST00000503426 685 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 NDUFA5P12-201ENST00000503796 343 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC091860.1-201ENST00000505723 432 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 NDUFB5P1-201ENST00000508134 564 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 MTCO3P7-201ENST00000510008 774 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 RNA5SP446-201ENST00000515955 82 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 RNU6-759P-201ENST00000516740 103 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AP000676.2-201ENST00000529711 301 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AP001804.2-201ENST00000533932 910 ntBASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF549Q6P9A3 AC007115.1-201ENST00000546853 234 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms