Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX4Q06945 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX4Q06945 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX4Q06945 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SOX4Q06945 NAMPTP1-201ENST00000440465 2514 ntBASIC6.19□□□□□ -1.42
SOX4Q06945 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX4Q06945 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
SOX4Q06945 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX4Q06945 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 LINC02019-201ENST00000608605 2060 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 Y_RNA.25-201ENST00000362528 102 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 RNU6-216P-201ENST00000363282 104 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 Z97832.1-201ENST00000402490 328 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AL603766.1-201ENST00000407763 664 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 RNA5SP251-201ENST00000410614 137 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 Y_RNA.608-201ENST00000410647 95 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX4Q06945 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX4Q06945 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX4Q06945 ISCA1P6-201ENST00000427740 390 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SOX4Q06945 AC096775.1-201ENST00000437724 448 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX4Q06945 CYCSP51-201ENST00000443545 318 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 RPL7P59-201ENST00000447700 943 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 ARPC3P5-201ENST00000448802 534 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 RPS20P20-201ENST00000460498 340 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 TRBV5-2-201ENST00000489095 273 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AL136038.1-201ENST00000497246 351 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 RN7SL466P-201ENST00000497546 295 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AC090638.1-201ENST00000498296 909 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX4Q06945 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX4Q06945 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX4Q06945 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AC013828.2-201ENST00000532487 235 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AC034268.2-201ENST00000571784 482 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX4Q06945 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX4Q06945 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX4Q06945 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX4Q06945 AL162413.1-201ENST00000603198 110 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AL589674.2-201ENST00000604304 337 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX4Q06945 AC231657.1-201ENST00000624313 397 ntBASIC6.18□□□□□ -1.42
SOX4Q06945 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SOX4Q06945 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX4Q06945 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX4Q06945 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SOX4Q06945 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX4Q06945 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX4Q06945 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SOX4Q06945 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX4Q06945 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
SOX4Q06945 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX4Q06945 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX4Q06945 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX4Q06945 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX4Q06945 AL731532.1-201ENST00000623972 4236 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX4Q06945 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX4Q06945 U8.3-201ENST00000363321 132 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 RNA5SP131-201ENST00000365452 119 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 SNORD116-23-201ENST00000384645 92 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AL356432.1-201ENST00000405809 419 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 OR2AT2P-201ENST00000413438 905 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX4Q06945 AC013429.2-201ENST00000418798 781 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 PDCL2P1-201ENST00000419302 352 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AL353729.1-201ENST00000425044 720 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX4Q06945 NPM1P34-201ENST00000428821 893 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 SAR1AP4-201ENST00000429225 591 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX4Q06945 SKP1P1-201ENST00000438081 489 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 UBE2V1P5-201ENST00000440070 405 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX4Q06945 AC140076.1-201ENST00000449897 361 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 RN7SL570P-201ENST00000484405 292 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.17□□□□□ -1.42
SOX4Q06945 AC098799.3-201ENST00000506095 438 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AC105384.2-201ENST00000508433 640 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX4Q06945 RNU6-583P-201ENST00000516012 92 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 SNORA81.2-201ENST00000516868 170 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX4Q06945 AP003467.2-201ENST00000520175 319 ntBASIC6.17□□□□□ -1.42
SOX4Q06945 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.17□□□□□ -1.42
SOX4Q06945 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX4Q06945 AL352979.3-201ENST00000553515 247 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms