Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL133264.1-201ENST00000407157 562 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AP000534.2-201ENST00000412729 568 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.7□□□□□ -1.66
RAE1P78406 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.7□□□□□ -1.66
RAE1P78406 P2RY10P2-201ENST00000416730 913 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.7□□□□□ -1.66
RAE1P78406 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.7□□□□□ -1.66
RAE1P78406 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.7□□□□□ -1.66
RAE1P78406 AC000111.2-201ENST00000448200 210 ntBASIC4.7□□□□□ -1.66
RAE1P78406 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.7□□□□□ -1.66
RAE1P78406 GYG1P1-201ENST00000460864 698 ntBASIC4.7□□□□□ -1.66
RAE1P78406 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.7□□□□□ -1.66
RAE1P78406 RPL7P1-201ENST00000468161 747 ntBASIC4.7□□□□□ -1.66
RAE1P78406 RPL7P9-201ENST00000468715 747 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.7□□□□□ -1.66
RAE1P78406 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.7□□□□□ -1.66
RAE1P78406 RNA5SP249-201ENST00000516127 99 ntBASIC4.7□□□□□ -1.66
RAE1P78406 RNA5SP92-201ENST00000516437 110 ntBASIC4.7□□□□□ -1.66
RAE1P78406 snoU109.6-201ENST00000516831 118 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AF279873.1-201ENST00000523393 313 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AP001207.1-201ENST00000524051 481 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.7□□□□□ -1.66
RAE1P78406 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.7□□□□□ -1.66
RAE1P78406 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.7□□□□□ -1.66
RAE1P78406 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.7□□□□□ -1.66
RAE1P78406 SULT1C2P2-201ENST00000562517 294 ntBASIC4.7□□□□□ -1.66
RAE1P78406 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAE1P78406 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.7□□□□□ -1.66
RAE1P78406 MIR3915-201ENST00000578518 97 ntBASIC4.7□□□□□ -1.66
RAE1P78406 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.7□□□□□ -1.66
RAE1P78406 AP000811.1-201ENST00000603803 651 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AC091488.1-201ENST00000604239 660 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AC018714.1-201ENST00000605028 208 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AC112220.3-201ENST00000605502 502 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AC023813.4-201ENST00000607580 580 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AL136981.2-201ENST00000617319 734 ntBASIC4.7□□□□□ -1.66
RAE1P78406 Z69908.1-201ENST00000622603 247 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AC098679.4-201ENST00000624241 654 ntBASIC4.7□□□□□ -1.66
RAE1P78406 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.7□□□□□ -1.66
RAE1P78406 MKKS-204ENST00000639674 192 ntBASIC4.7□□□□□ -1.66
RAE1P78406 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RAE1P78406 STX3-208ENST00000641815 3236 ntBASIC4.7□□□□□ -1.66
RAE1P78406 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAE1P78406 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAE1P78406 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAE1P78406 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RAE1P78406 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 MTND4P34-201ENST00000572715 1371 ntBASIC4.69□□□□□ -1.66
RAE1P78406 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 Y_RNA.51-201ENST00000362725 102 ntBASIC4.69□□□□□ -1.66
RAE1P78406 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RAE1P78406 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RAE1P78406 AL357515.1-201ENST00000402967 542 ntBASIC4.69□□□□□ -1.66
RAE1P78406 GSTM3P2-201ENST00000412746 530 ntBASIC4.69□□□□□ -1.66
RAE1P78406 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 AF186996.5-201ENST00000418098 904 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 AL035407.1-201ENST00000429211 571 ntBASIC4.69□□□□□ -1.66
RAE1P78406 SKP1P3-201ENST00000429280 487 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC129850.1-201ENST00000436203 508 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 AC010307.1-201ENST00000467206 836 ntBASIC4.69□□□□□ -1.66
RAE1P78406 RN7SL727P-201ENST00000482164 296 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC069304.1-201ENST00000491593 704 ntBASIC4.69□□□□□ -1.66
RAE1P78406 RN7SL244P-201ENST00000493405 297 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC092045.1-201ENST00000495716 1231 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC011352.3-201ENST00000505162 593 ntBASIC4.69□□□□□ -1.66
RAE1P78406 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.69□□□□□ -1.66
RAE1P78406 MRPS33P2-201ENST00000507850 322 ntBASIC4.69□□□□□ -1.66
RAE1P78406 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.69□□□□□ -1.66
RAE1P78406 RNU6-678P-201ENST00000516832 109 ntBASIC4.69□□□□□ -1.66
RAE1P78406 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.69□□□□□ -1.66
RAE1P78406 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 AC024909.2-201ENST00000553035 286 ntBASIC4.69□□□□□ -1.66
RAE1P78406 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RAE1P78406 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.69□□□□□ -1.66
RAE1P78406 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.69□□□□□ -1.66
RAE1P78406 MEMO1P5-201ENST00000604810 406 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.69□□□□□ -1.66
RAE1P78406 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.69□□□□□ -1.66
RAE1P78406 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.69□□□□□ -1.66
RAE1P78406 AC005962.2-201ENST00000611427 652 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC009163.6-201ENST00000612367 342 ntBASIC4.69□□□□□ -1.66
RAE1P78406 MIR6862-1-201ENST00000613016 70 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC005332.6-201ENST00000613178 446 ntBASIC4.69□□□□□ -1.66
RAE1P78406 MIR6862-2-201ENST00000614755 70 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms