Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RPL39P62891 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL39P62891 FAM91A3P-201ENST00000456826 2544 ntBASIC2.49□□□□□ -2.01
RPL39P62891 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
RPL39P62891 AC104297.1-201ENST00000393779 870 ntBASIC2.49□□□□□ -2.01
RPL39P62891 RNA5SP107-201ENST00000411358 122 ntBASIC2.49□□□□□ -2.01
RPL39P62891 AC009237.5-201ENST00000414271 501 ntBASIC2.49□□□□□ -2.01
RPL39P62891 RBMY2KP-201ENST00000418221 992 ntBASIC2.49□□□□□ -2.01
RPL39P62891 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.49□□□□□ -2.01
RPL39P62891 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.49□□□□□ -2.01
RPL39P62891 SDCBPP2-201ENST00000424643 885 ntBASIC2.49□□□□□ -2.01
RPL39P62891 AC073143.1-201ENST00000436316 395 ntBASIC2.49□□□□□ -2.01
RPL39P62891 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.49□□□□□ -2.01
RPL39P62891 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.49□□□□□ -2.01
RPL39P62891 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.49□□□□□ -2.01
RPL39P62891 HMGN1P18-201ENST00000457642 277 ntBASIC2.49□□□□□ -2.01
RPL39P62891 RN7SL610P-201ENST00000463845 291 ntBASIC2.49□□□□□ -2.01
RPL39P62891 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.49□□□□□ -2.01
RPL39P62891 RN7SL323P-201ENST00000494712 295 ntBASIC2.49□□□□□ -2.01
RPL39P62891 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.49□□□□□ -2.01
RPL39P62891 AC021146.5-201ENST00000503544 545 ntBASIC2.49□□□□□ -2.01
RPL39P62891 USP9YP5-201ENST00000511770 630 ntBASIC2.49□□□□□ -2.01
RPL39P62891 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.49□□□□□ -2.01
RPL39P62891 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.49□□□□□ -2.01
RPL39P62891 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC2.49□□□□□ -2.01
RPL39P62891 AP000926.4-201ENST00000527351 454 ntBASIC2.49□□□□□ -2.01
RPL39P62891 AC009643.1-201ENST00000532030 391 ntBASIC2.49□□□□□ -2.01
RPL39P62891 PDCD5P1-201ENST00000543528 309 ntBASIC2.49□□□□□ -2.01
RPL39P62891 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RPL39P62891 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.49□□□□□ -2.01
RPL39P62891 MIR5096-201ENST00000583713 70 ntBASIC2.49□□□□□ -2.01
RPL39P62891 AL034374.2-201ENST00000605281 548 ntBASIC2.49□□□□□ -2.01
RPL39P62891 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.49□□□□□ -2.01
RPL39P62891 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RPL39P62891 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPL39P62891 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.49□□□□□ -2.01
RPL39P62891 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPL39P62891 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
RPL39P62891 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.48□□□□□ -2.01
RPL39P62891 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 AC007496.3-201ENST00000624987 3443 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AC058791.1-201ENST00000608412 3198 ntBASIC2.48□□□□□ -2.01
RPL39P62891 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RPL39P62891 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.48□□□□□ -2.01
RPL39P62891 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RPL39P62891 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
RPL39P62891 SKINT1L-201ENST00000401057 817 ntBASIC2.48□□□□□ -2.01
RPL39P62891 SNORA3.3-201ENST00000408712 125 ntBASIC2.48□□□□□ -2.01
RPL39P62891 RNA5SP31-201ENST00000411144 127 ntBASIC2.48□□□□□ -2.01
RPL39P62891 RANP4-201ENST00000413361 655 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 AL159169.1-201ENST00000421119 127 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 RPS6P12-201ENST00000432491 726 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.48□□□□□ -2.01
RPL39P62891 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.48□□□□□ -2.01
RPL39P62891 HMGB3P8-201ENST00000449709 577 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 CYCSP42-201ENST00000450823 238 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.48□□□□□ -2.01
RPL39P62891 AC010618.1-201ENST00000469924 477 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AC007537.2-201ENST00000472093 511 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AC006463.2-201ENST00000473326 348 ntBASIC2.48□□□□□ -2.01
RPL39P62891 TRBV8-2-201ENST00000475637 270 ntBASIC2.48□□□□□ -2.01
RPL39P62891 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC2.48□□□□□ -2.01
RPL39P62891 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.48□□□□□ -2.01
RPL39P62891 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.48□□□□□ -2.01
RPL39P62891 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 SNORA70.19-201ENST00000516717 90 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.48□□□□□ -2.01
RPL39P62891 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.48□□□□□ -2.01
RPL39P62891 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 AC004024.1-201ENST00000549244 247 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.48□□□□□ -2.01
RPL39P62891 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.48□□□□□ -2.01
RPL39P62891 AC023575.1-201ENST00000580510 358 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AC068790.4-201ENST00000602474 263 ntBASIC2.48□□□□□ -2.01
RPL39P62891 AC023043.4-201ENST00000612081 449 ntBASIC2.48□□□□□ -2.01
RPL39P62891 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 AP001005.3-201ENST00000622049 129 ntBASIC2.48□□□□□ -2.01
RPL39P62891 OTUD4P1-201ENST00000237841 3067 ntBASIC2.48□□□□□ -2.01
RPL39P62891 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RPL39P62891 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RPL39P62891 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 AC095050.2-201ENST00000510748 1458 ntBASIC2.47□□□□□ -2.01
RPL39P62891 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms