Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL513325.1-201ENST00000417716 1034 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 ELOCP9-201ENST00000418624 239 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC108075.1-201ENST00000424692 529 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AL138785.1-201ENST00000425821 331 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-1P43699 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AL451139.1-201ENST00000434718 346 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.94□□□□□ -1.78
NKX2-1P43699 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-1P43699 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 RAB11AP1-201ENST00000442978 646 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 RPL7P31-201ENST00000450192 724 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 Z99714.1-201ENST00000450463 807 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC004263.1-201ENST00000479327 332 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 RPL7P39-201ENST00000481157 744 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 MTND2P14-201ENST00000482139 351 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-1P43699 MTCYBP35-201ENST00000503630 1137 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-1P43699 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 BX510359.5-201ENST00000515651 304 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-1P43699 OR5AN2P-201ENST00000534535 896 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 PDCD5P1-201ENST00000543528 309 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AGGF1P6-201ENST00000569213 976 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AC022662.1-201ENST00000580252 331 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 GAS5-AS1-201ENST00000602767 694 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC021749.1-201ENST00000604322 607 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AP003973.1-201ENST00000604639 691 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AC005840.5-201ENST00000619166 599 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AP002791.1-201ENST00000623291 381 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC068057.2-201ENST00000624047 895 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 AC068620.4-201ENST00000636730 1182 ntBASIC3.94□□□□□ -1.78
NKX2-1P43699 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-1P43699 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-1P43699 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NKX2-1P43699 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-1P43699 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 HSPA8P18-201ENST00000439846 1928 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AC025125.1-201ENST00000624743 1922 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AC008758.3-201ENST00000507003 1829 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-1P43699 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-1P43699 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NKX2-1P43699 OR52B1P-201ENST00000316506 909 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 RNA5SP435-201ENST00000364044 108 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 RNA5SP242-201ENST00000364171 118 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AL121978.1-201ENST00000402778 359 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AP002530.1-201ENST00000405705 684 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 OR3A2-201ENST00000408891 1076 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-1P43699 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-1P43699 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-1P43699 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.93□□□□□ -1.78
NKX2-1P43699 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.93□□□□□ -1.78
NKX2-1P43699 OR2AM1P-201ENST00000422137 422 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-1P43699 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-1P43699 MTCO1P3-201ENST00000429327 192 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 MTCO1P54-201ENST00000430139 712 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 UBE2V1P1-201ENST00000430836 445 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-1P43699 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-1P43699 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-1P43699 B3GNT2P1-201ENST00000434960 952 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.93□□□□□ -1.78
NKX2-1P43699 AL591719.1-201ENST00000444669 744 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-1P43699 IGHV5-78-201ENST00000450948 295 ntBASIC3.93□□□□□ -1.78
NKX2-1P43699 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms