Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP6P35125 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP6P35125 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP6P35125 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.07□□□□□ -1.6
USP6P35125 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP6P35125 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 RNA5SP267-201ENST00000364893 126 ntBASIC5.06□□□□□ -1.6
USP6P35125 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.06□□□□□ -1.6
USP6P35125 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.06□□□□□ -1.6
USP6P35125 AC115115.1-201ENST00000449927 248 ntBASIC5.06□□□□□ -1.6
USP6P35125 BX510359.1-201ENST00000456973 237 ntBASIC5.06□□□□□ -1.6
USP6P35125 AP002371.1-201ENST00000463604 433 ntBASIC5.06□□□□□ -1.6
USP6P35125 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
USP6P35125 AC108941.1-201ENST00000502853 530 ntBASIC5.06□□□□□ -1.6
USP6P35125 SNORA70.17-201ENST00000516449 133 ntBASIC5.06□□□□□ -1.6
USP6P35125 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.06□□□□□ -1.6
USP6P35125 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.06□□□□□ -1.6
USP6P35125 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.06□□□□□ -1.6
USP6P35125 MIR3124-201ENST00000582636 67 ntBASIC5.06□□□□□ -1.6
USP6P35125 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.06□□□□□ -1.6
USP6P35125 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.06□□□□□ -1.6
USP6P35125 AL121890.2-201ENST00000617644 465 ntBASIC5.06□□□□□ -1.6
USP6P35125 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.06□□□□□ -1.6
USP6P35125 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
USP6P35125 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
USP6P35125 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.06□□□□□ -1.6
USP6P35125 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 AL078595.2-201ENST00000605309 1780 ntBASIC5.06□□□□□ -1.6
USP6P35125 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 OR6K3-202ENST00000368146 996 ntBASIC5.06□□□□□ -1.6
USP6P35125 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.06□□□□□ -1.6
USP6P35125 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.06□□□□□ -1.6
USP6P35125 AL158156.1-201ENST00000422509 473 ntBASIC5.06□□□□□ -1.6
USP6P35125 ATP5JP1-201ENST00000431631 322 ntBASIC5.06□□□□□ -1.6
USP6P35125 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.06□□□□□ -1.6
USP6P35125 CYCSP35-201ENST00000451978 304 ntBASIC5.06□□□□□ -1.6
USP6P35125 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP6P35125 AC113398.2-201ENST00000507630 558 ntBASIC5.06□□□□□ -1.6
USP6P35125 SNORA70.18-201ENST00000516696 98 ntBASIC5.06□□□□□ -1.6
USP6P35125 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.06□□□□□ -1.6
USP6P35125 AC069240.1-201ENST00000548774 375 ntBASIC5.06□□□□□ -1.6
USP6P35125 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.06□□□□□ -1.6
USP6P35125 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.06□□□□□ -1.6
USP6P35125 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.06□□□□□ -1.6
USP6P35125 AC055839.1-201ENST00000634467 498 ntBASIC5.06□□□□□ -1.6
USP6P35125 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
USP6P35125 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
USP6P35125 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.05□□□□□ -1.6
USP6P35125 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP6P35125 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP6P35125 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP6P35125 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP6P35125 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP6P35125 RNU1-33P-201ENST00000364249 162 ntBASIC5.05□□□□□ -1.6
USP6P35125 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.05□□□□□ -1.6
USP6P35125 RNA5SP146-201ENST00000410743 123 ntBASIC5.05□□□□□ -1.6
USP6P35125 AC096644.3-201ENST00000416788 338 ntBASIC5.05□□□□□ -1.6
USP6P35125 DPPA2P2-201ENST00000418220 897 ntBASIC5.05□□□□□ -1.6
USP6P35125 DPY19L1P2-201ENST00000426647 915 ntBASIC5.05□□□□□ -1.6
USP6P35125 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.05□□□□□ -1.6
USP6P35125 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.05□□□□□ -1.6
USP6P35125 AC069285.2-201ENST00000440210 275 ntBASIC5.05□□□□□ -1.6
USP6P35125 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP6P35125 RBMY2UP-201ENST00000453474 324 ntBASIC5.05□□□□□ -1.6
USP6P35125 RPL23AP12-201ENST00000467573 473 ntBASIC5.05□□□□□ -1.6
USP6P35125 AP000926.3-201ENST00000497201 299 ntBASIC5.05□□□□□ -1.6
USP6P35125 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.05□□□□□ -1.6
USP6P35125 UBTFL9-201ENST00000534504 1148 ntBASIC5.05□□□□□ -1.6
USP6P35125 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.05□□□□□ -1.6
USP6P35125 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.05□□□□□ -1.6
USP6P35125 AL390816.3-201ENST00000604527 1066 ntBASIC5.05□□□□□ -1.6
USP6P35125 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
USP6P35125 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP6P35125 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
USP6P35125 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP6P35125 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
USP6P35125 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.04□□□□□ -1.6
USP6P35125 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP6P35125 AC120036.2-201ENST00000509729 1474 ntBASIC5.04□□□□□ -1.6
USP6P35125 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP6P35125 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.04□□□□□ -1.6
USP6P35125 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP6P35125 AL356274.2-201ENST00000624379 3752 ntBASIC5.04□□□□□ -1.6
USP6P35125 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
USP6P35125 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.04□□□□□ -1.6
USP6P35125 RNU1-108P-201ENST00000362556 161 ntBASIC5.04□□□□□ -1.6
USP6P35125 RNA5SP424-201ENST00000390988 115 ntBASIC5.04□□□□□ -1.6
USP6P35125 OR4K6P-201ENST00000416478 897 ntBASIC5.04□□□□□ -1.6
USP6P35125 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.04□□□□□ -1.6
USP6P35125 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.04□□□□□ -1.6
USP6P35125 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.04□□□□□ -1.6
USP6P35125 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.04□□□□□ -1.6
USP6P35125 RPS29P2-201ENST00000479278 136 ntBASIC5.04□□□□□ -1.6
USP6P35125 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms