Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CKS2P33552 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CKS2P33552 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.76□□□□□ -1.97
CKS2P33552 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CKS2P33552 AC073073.2-201ENST00000609827 2578 ntBASIC2.75□□□□□ -1.97
CKS2P33552 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CKS2P33552 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CKS2P33552 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CKS2P33552 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CKS2P33552 RNA5SP235-201ENST00000365411 114 ntBASIC2.75□□□□□ -1.97
CKS2P33552 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 RNU6-328P-201ENST00000390887 106 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AL590704.1-201ENST00000402856 794 ntBASIC2.75□□□□□ -1.97
CKS2P33552 RPL31P52-201ENST00000407532 367 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 AC011933.1-201ENST00000413334 321 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC108032.1-201ENST00000416706 207 ntBASIC2.75□□□□□ -1.97
CKS2P33552 TCEA1P2-201ENST00000420496 906 ntBASIC2.75□□□□□ -1.97
CKS2P33552 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 AC002069.1-201ENST00000429649 1159 ntBASIC2.75□□□□□ -1.97
CKS2P33552 RPS29P17-201ENST00000430795 166 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 AC144530.1-201ENST00000452862 555 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC116533.1-201ENST00000459748 321 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC010468.1-201ENST00000461022 817 ntBASIC2.75□□□□□ -1.97
CKS2P33552 RPL7P48-201ENST00000461513 746 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS2P33552 ACTG1P13-201ENST00000486987 1043 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC004453.1-201ENST00000487895 408 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AP001086.1-201ENST00000494882 321 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC005912.1-201ENST00000495392 255 ntBASIC2.75□□□□□ -1.97
CKS2P33552 PCBP2P3-201ENST00000509726 843 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.75□□□□□ -1.97
CKS2P33552 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC2.75□□□□□ -1.97
CKS2P33552 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 AL121766.1-201ENST00000547436 487 ntBASIC2.75□□□□□ -1.97
CKS2P33552 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 AL161713.1-201ENST00000555538 145 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 MIR5047-201ENST00000579212 100 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS2P33552 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS2P33552 RPL12P25-202ENST00000598100 674 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC093765.1-201ENST00000603758 881 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC116651.1-201ENST00000609724 556 ntBASIC2.75□□□□□ -1.97
CKS2P33552 MIR7151-201ENST00000617477 60 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC011944.2-201ENST00000624440 683 ntBASIC2.75□□□□□ -1.97
CKS2P33552 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS2P33552 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CKS2P33552 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS2P33552 AC131971.1-201ENST00000332881 1482 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC100871.1-201ENST00000507871 1456 ntBASIC2.75□□□□□ -1.97
CKS2P33552 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS2P33552 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS2P33552 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CKS2P33552 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS2P33552 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CKS2P33552 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.74□□□□□ -1.97
CKS2P33552 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CKS2P33552 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 RNA5SP87-201ENST00000384155 118 ntBASIC2.74□□□□□ -1.97
CKS2P33552 RNU6-225P-201ENST00000384613 103 ntBASIC2.74□□□□□ -1.97
CKS2P33552 MIR129-1-201ENST00000384972 72 ntBASIC2.74□□□□□ -1.97
CKS2P33552 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 AL109941.1-201ENST00000401925 229 ntBASIC2.74□□□□□ -1.97
CKS2P33552 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS2P33552 AL590806.1-201ENST00000415818 853 ntBASIC2.74□□□□□ -1.97
CKS2P33552 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 AC092832.1-201ENST00000422934 400 ntBASIC2.74□□□□□ -1.97
CKS2P33552 AC093084.1-201ENST00000424233 687 ntBASIC2.74□□□□□ -1.97
CKS2P33552 BTF3P10-201ENST00000433415 495 ntBASIC2.74□□□□□ -1.97
CKS2P33552 MRPS18BP2-201ENST00000434310 759 ntBASIC2.74□□□□□ -1.97
CKS2P33552 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.74□□□□□ -1.97
CKS2P33552 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKS2P33552 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS2P33552 RPS11P1-201ENST00000451072 473 ntBASIC2.74□□□□□ -1.97
CKS2P33552 AC099563.1-201ENST00000456086 418 ntBASIC2.74□□□□□ -1.97
CKS2P33552 RPL23AP62-201ENST00000463396 453 ntBASIC2.74□□□□□ -1.97
CKS2P33552 AC087312.1-201ENST00000471411 480 ntBASIC2.74□□□□□ -1.97
CKS2P33552 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS2P33552 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.74□□□□□ -1.97
CKS2P33552 AL132838.2-201ENST00000492041 314 ntBASIC2.74□□□□□ -1.97
CKS2P33552 AC108471.1-201ENST00000513977 287 ntBASIC2.74□□□□□ -1.97
CKS2P33552 Vault.1-201ENST00000516474 102 ntBASIC2.74□□□□□ -1.97
CKS2P33552 RNA5SP179-201ENST00000517284 121 ntBASIC2.74□□□□□ -1.97
CKS2P33552 NDUFB9P3-201ENST00000521269 501 ntBASIC2.74□□□□□ -1.97
CKS2P33552 NPM1P47-201ENST00000560843 856 ntBASIC2.74□□□□□ -1.97
CKS2P33552 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS2P33552 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC2.74□□□□□ -1.97
CKS2P33552 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS2P33552 AC011492.1-201ENST00000600023 315 ntBASIC2.74□□□□□ -1.97
CKS2P33552 AL049844.2-201ENST00000604280 628 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms