Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-304P-201ENST00000364855 107 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AL161909.1-201ENST00000397390 712 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 RPL17P36-201ENST00000420302 549 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC007064.3-201ENST00000422608 359 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC093716.1-201ENST00000435923 377 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 CACYBPP1-201ENST00000438592 684 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC114755.5-201ENST00000447760 831 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 HMGB3P21-201ENST00000452483 547 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 NUTF2P7-201ENST00000453086 375 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 SNRPGP5-201ENST00000456003 220 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 RPL36AP13-201ENST00000457490 317 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 RPL7P19-201ENST00000469948 618 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 STRADBP1-201ENST00000478954 1281 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 GNRHR2P1-201ENST00000555315 631 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC007224.1-201ENST00000564410 144 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 MIR4716-201ENST00000579628 84 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC128687.2-201ENST00000609657 566 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AL354950.1-201ENST00000614150 568 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC068831.8-201ENST00000620171 435 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AC000123.2-201ENST00000623124 461 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 AP005264.7-201ENST00000625003 745 ntBASIC3.08□□□□□ -1.92
HLA-DMBP28068 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMBP28068 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMBP28068 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 RNU1-87P-201ENST00000363727 170 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 RNA5SP479-201ENST00000364858 117 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMBP28068 MIR1193-201ENST00000408109 78 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 RN7SKP177-201ENST00000410567 355 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AL365396.1-201ENST00000430854 671 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC087650.1-201ENST00000431445 468 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC011742.1-201ENST00000431448 434 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 BMS1P19-201ENST00000433925 393 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 RPS4XP4-201ENST00000443195 763 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 RPL7P31-201ENST00000450192 724 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 OR6C72P-201ENST00000451403 892 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 RPL29P14-201ENST00000495837 428 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC108471.1-201ENST00000513977 287 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 MTND1P6-201ENST00000523621 946 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 EIF4EP5-201ENST00000528228 640 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC010680.3-201ENST00000604215 520 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 AC009318.3-201ENST00000616916 503 ntBASIC3.07□□□□□ -1.92
HLA-DMBP28068 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms