Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CYCSP20-201ENST00000473154 315 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC017037.1-201ENST00000508460 471 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC121161.1-201ENST00000510606 652 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 OR5H4P-201ENST00000510851 923 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 OR7H2P-201ENST00000513483 306 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC068339.2-201ENST00000534395 618 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC104072.1-201ENST00000568817 668 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 MTATP6P2-201ENST00000603319 678 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC211433.2-201ENST00000608433 387 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC004948.1-201ENST00000609858 672 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC064801.1-201ENST00000612025 407 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC233309.1-201ENST00000619522 751 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 RMST_9.1-201ENST00000619945 193 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AP000943.4-201ENST00000622912 357 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 FP325313.1-201ENST00000638228 703 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.03□□□□□ -1.76
MT-ND1P03886 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
MT-ND1P03886 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.03□□□□□ -1.76
MT-ND1P03886 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 RN7SKP278-201ENST00000410504 342 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC069282.1-201ENST00000411911 526 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AL161631.1-201ENST00000417933 486 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AL606495.1-201ENST00000422100 813 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.03□□□□□ -1.76
MT-ND1P03886 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AC023347.2-201ENST00000433994 462 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.03□□□□□ -1.76
MT-ND1P03886 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.03□□□□□ -1.76
MT-ND1P03886 RNF2P1-201ENST00000442955 1010 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 RPL36AP15-201ENST00000444514 266 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.03□□□□□ -1.76
MT-ND1P03886 PPM1AP1-201ENST00000502740 1135 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 MTATP6P22-201ENST00000507369 598 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.03□□□□□ -1.76
MT-ND1P03886 ATP1B1P1-201ENST00000509767 915 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC133963.2-201ENST00000513686 578 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.03□□□□□ -1.76
MT-ND1P03886 COX6B1P6-201ENST00000522347 255 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.03□□□□□ -1.76
MT-ND1P03886 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.03□□□□□ -1.76
MT-ND1P03886 RN7SL690P-201ENST00000582087 240 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AC026741.1-201ENST00000605892 482 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AL391834.2-201ENST00000609982 546 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
MT-ND1P03886 AL121873.1-201ENST00000616013 524 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC243756.2-201ENST00000618406 463 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC007546.1-201ENST00000619452 559 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC009269.6-201ENST00000621778 588 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 MIR4727-201ENST00000622232 55 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 MIR6719-201ENST00000622428 87 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 AC015813.6-201ENST00000624409 5808 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 MFSD8-220ENST00000641243 1422 ntBASIC4.03□□□□□ -1.76
MT-ND1P03886 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MT-ND1P03886 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
MT-ND1P03886 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.02□□□□□ -1.77
MT-ND1P03886 AL136964.1-201ENST00000622038 2990 ntBASIC4.02□□□□□ -1.77
MT-ND1P03886 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MT-ND1P03886 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
MT-ND1P03886 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.02□□□□□ -1.77
MT-ND1P03886 AC025125.1-201ENST00000624743 1922 ntBASIC4.02□□□□□ -1.77
MT-ND1P03886 MIR16-2-201ENST00000362117 81 ntBASIC4.02□□□□□ -1.77
MT-ND1P03886 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MT-ND1P03886 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms