Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL1A1P02452 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 RNA5SP267-201ENST00000364893 126 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.52□□□□□ -1.69
COL1A1P02452 AC096644.3-201ENST00000416788 338 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 AL158156.1-201ENST00000422509 473 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.52□□□□□ -1.69
COL1A1P02452 ELOCP18-201ENST00000434209 337 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 TMX2P1-201ENST00000436507 708 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 AC006511.1-201ENST00000470614 315 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 GMPSP1-201ENST00000514075 579 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 RN7SKP13-201ENST00000515933 244 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.52□□□□□ -1.69
COL1A1P02452 SETP1-201ENST00000556014 845 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.52□□□□□ -1.69
COL1A1P02452 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.52□□□□□ -1.69
COL1A1P02452 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.52□□□□□ -1.69
COL1A1P02452 AL139395.1-201ENST00000603662 160 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 AL354760.1-201ENST00000608357 643 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.52□□□□□ -1.69
COL1A1P02452 MIR3651-201ENST00000630427 90 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 AC139426.3-201ENST00000605648 2059 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 AC068254.2-201ENST00000623938 3577 ntBASIC4.52□□□□□ -1.69
COL1A1P02452 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COL1A1P02452 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
COL1A1P02452 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL1A1P02452 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL1A1P02452 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL1A1P02452 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL1A1P02452 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL1A1P02452 MIR218-2-201ENST00000385006 110 ntBASIC4.51□□□□□ -1.69
COL1A1P02452 AL590609.2-201ENST00000421430 368 ntBASIC4.51□□□□□ -1.69
COL1A1P02452 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.51□□□□□ -1.69
COL1A1P02452 AL645931.1-201ENST00000439737 410 ntBASIC4.51□□□□□ -1.69
COL1A1P02452 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL1A1P02452 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL1A1P02452 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.51□□□□□ -1.69
COL1A1P02452 RPL5P16-201ENST00000471467 790 ntBASIC4.51□□□□□ -1.69
COL1A1P02452 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
COL1A1P02452 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.51□□□□□ -1.69
COL1A1P02452 AC139783.2-201ENST00000504847 1145 ntBASIC4.51□□□□□ -1.69
COL1A1P02452 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.51□□□□□ -1.69
COL1A1P02452 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.51□□□□□ -1.69
COL1A1P02452 OR5B10P-201ENST00000532869 642 ntBASIC4.51□□□□□ -1.69
COL1A1P02452 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.51□□□□□ -1.69
COL1A1P02452 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.51□□□□□ -1.69
COL1A1P02452 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.51□□□□□ -1.69
COL1A1P02452 DDX18P6-201ENST00000450119 1997 ntBASIC4.51□□□□□ -1.69
COL1A1P02452 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL1A1P02452 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL1A1P02452 AC093535.2-201ENST00000624769 2326 ntBASIC4.51□□□□□ -1.69
COL1A1P02452 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.51□□□□□ -1.69
COL1A1P02452 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.51□□□□□ -1.69
COL1A1P02452 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.51□□□□□ -1.69
COL1A1P02452 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
COL1A1P02452 SNORD9-201ENST00000362566 104 ntBASIC4.5□□□□□ -1.69
COL1A1P02452 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL1A1P02452 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COL1A1P02452 AL160275.2-201ENST00000412010 394 ntBASIC4.5□□□□□ -1.69
COL1A1P02452 AC010740.1-201ENST00000417035 684 ntBASIC4.5□□□□□ -1.69
COL1A1P02452 DBIP2-201ENST00000419076 262 ntBASIC4.5□□□□□ -1.69
COL1A1P02452 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.5□□□□□ -1.69
COL1A1P02452 APOOP2-201ENST00000461561 539 ntBASIC4.5□□□□□ -1.69
COL1A1P02452 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.5□□□□□ -1.69
COL1A1P02452 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.5□□□□□ -1.69
COL1A1P02452 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.5□□□□□ -1.69
COL1A1P02452 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.5□□□□□ -1.69
COL1A1P02452 AC007458.1-201ENST00000542812 373 ntBASIC4.5□□□□□ -1.69
COL1A1P02452 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.5□□□□□ -1.69
COL1A1P02452 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.5□□□□□ -1.69
COL1A1P02452 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.5□□□□□ -1.69
COL1A1P02452 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.5□□□□□ -1.69
COL1A1P02452 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.5□□□□□ -1.69
COL1A1P02452 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.5□□□□□ -1.69
COL1A1P02452 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.5□□□□□ -1.69
COL1A1P02452 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
COL1A1P02452 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL1A1P02452 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL1A1P02452 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL1A1P02452 MIR490-201ENST00000384865 128 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC096664.2-201ENST00000411843 406 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.49□□□□□ -1.69
COL1A1P02452 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.49□□□□□ -1.69
COL1A1P02452 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.49□□□□□ -1.69
COL1A1P02452 CYCSP32-201ENST00000440548 321 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL1A1P02452 RPS26P15-201ENST00000488067 348 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 RANP9-201ENST00000519957 271 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC006960.3-201ENST00000561845 705 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AC244258.1-201ENST00000637553 1071 ntBASIC4.49□□□□□ -1.69
COL1A1P02452 AP000553.6-201ENST00000641242 118 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms