Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MBD4O95243 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
MBD4O95243 AC140479.6-201ENST00000633535 357 ntBASIC5.24□□□□□ -1.57
MBD4O95243 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MBD4O95243 MTCO1P6-201ENST00000481192 1384 ntBASIC5.24□□□□□ -1.57
MBD4O95243 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MBD4O95243 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
MBD4O95243 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
MBD4O95243 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
MBD4O95243 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MBD4O95243 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MBD4O95243 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MBD4O95243 MAPK10-286ENST00000641208 8747 ntBASIC5.24□□□□□ -1.57
MBD4O95243 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.23□□□□□ -1.57
MBD4O95243 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
MBD4O95243 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 RNA5SP307-201ENST00000362863 116 ntBASIC5.23□□□□□ -1.57
MBD4O95243 RNU1-132P-201ENST00000364300 164 ntBASIC5.23□□□□□ -1.57
MBD4O95243 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.23□□□□□ -1.57
MBD4O95243 RNU6-207P-201ENST00000384137 107 ntBASIC5.23□□□□□ -1.57
MBD4O95243 SNORA51.12-201ENST00000384448 134 ntBASIC5.23□□□□□ -1.57
MBD4O95243 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MBD4O95243 OR6C69P-201ENST00000394268 893 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AL049693.1-201ENST00000402760 611 ntBASIC5.23□□□□□ -1.57
MBD4O95243 SNORA11C-201ENST00000408532 129 ntBASIC5.23□□□□□ -1.57
MBD4O95243 SNORA74C-2-201ENST00000411179 201 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AC069282.1-201ENST00000411911 526 ntBASIC5.23□□□□□ -1.57
MBD4O95243 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 ELOCP11-201ENST00000436690 332 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 ELOCP16-201ENST00000444494 332 ntBASIC5.23□□□□□ -1.57
MBD4O95243 HMGN1P5-201ENST00000448591 263 ntBASIC5.23□□□□□ -1.57
MBD4O95243 VN1R32P-201ENST00000452234 905 ntBASIC5.23□□□□□ -1.57
MBD4O95243 HMGB3P21-201ENST00000452483 547 ntBASIC5.23□□□□□ -1.57
MBD4O95243 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.23□□□□□ -1.57
MBD4O95243 RPL30P11-201ENST00000495304 339 ntBASIC5.23□□□□□ -1.57
MBD4O95243 IGBP1P5-201ENST00000507524 1000 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.23□□□□□ -1.57
MBD4O95243 AC126365.2-201ENST00000580630 379 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.23□□□□□ -1.57
MBD4O95243 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.23□□□□□ -1.57
MBD4O95243 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 AL133445.2-201ENST00000611191 527 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 AC007546.1-201ENST00000619452 559 ntBASIC5.23□□□□□ -1.57
MBD4O95243 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.23□□□□□ -1.57
MBD4O95243 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
MBD4O95243 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MBD4O95243 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
MBD4O95243 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.23□□□□□ -1.57
MBD4O95243 AL592437.2-201ENST00000421655 2434 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AL158163.1-201ENST00000603915 1649 ntBASIC5.23□□□□□ -1.57
MBD4O95243 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MBD4O95243 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.22□□□□□ -1.57
MBD4O95243 ASNSP1-204ENST00000641977 1664 ntBASIC5.22□□□□□ -1.57
MBD4O95243 AC019155.1-201ENST00000382242 574 ntBASIC5.22□□□□□ -1.57
MBD4O95243 RNU1-44P-201ENST00000384453 163 ntBASIC5.22□□□□□ -1.57
MBD4O95243 RNU6-932P-201ENST00000391108 106 ntBASIC5.22□□□□□ -1.57
MBD4O95243 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.22□□□□□ -1.57
MBD4O95243 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 MFSD13B-201ENST00000420133 1290 ntBASIC5.22□□□□□ -1.57
MBD4O95243 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 FO393414.1-201ENST00000428697 1184 ntBASIC5.22□□□□□ -1.57
MBD4O95243 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.22□□□□□ -1.57
MBD4O95243 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.22□□□□□ -1.57
MBD4O95243 GXYLT1P1-201ENST00000446657 490 ntBASIC5.22□□□□□ -1.57
MBD4O95243 DNAJC19P8-201ENST00000452887 259 ntBASIC5.22□□□□□ -1.57
MBD4O95243 AC010618.1-201ENST00000469924 477 ntBASIC5.22□□□□□ -1.57
MBD4O95243 AC090013.1-201ENST00000485147 480 ntBASIC5.22□□□□□ -1.57
MBD4O95243 RN7SL812P-201ENST00000493791 279 ntBASIC5.22□□□□□ -1.57
MBD4O95243 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.22□□□□□ -1.57
MBD4O95243 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.22□□□□□ -1.57
MBD4O95243 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.22□□□□□ -1.57
MBD4O95243 AC087894.1-201ENST00000538359 518 ntBASIC5.22□□□□□ -1.57
MBD4O95243 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 MIR4789-201ENST00000577469 82 ntBASIC5.22□□□□□ -1.57
MBD4O95243 BNIP3P31-201ENST00000604515 566 ntBASIC5.22□□□□□ -1.57
MBD4O95243 AL590392.1-201ENST00000604960 446 ntBASIC5.22□□□□□ -1.57
MBD4O95243 AC005156.1-201ENST00000613371 573 ntBASIC5.22□□□□□ -1.57
MBD4O95243 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 AC018926.3-201ENST00000618841 406 ntBASIC5.22□□□□□ -1.57
MBD4O95243 AP003476.1-201ENST00000623984 516 ntBASIC5.22□□□□□ -1.57
MBD4O95243 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 FP325313.1-201ENST00000638228 703 ntBASIC5.22□□□□□ -1.57
MBD4O95243 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MBD4O95243 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MBD4O95243 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MBD4O95243 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.22□□□□□ -1.57
MBD4O95243 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.21□□□□□ -1.58
MBD4O95243 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
MBD4O95243 SNORD65C-201ENST00000390962 71 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms