Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL591623.2-201ENST00000449978 222 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 AC010733.1-201ENST00000451515 401 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 RFC5P1-201ENST00000454419 874 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 RPS5P7-201ENST00000456664 608 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 RN7SL826P-201ENST00000479724 288 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF3O43395 MRPS36P3-201ENST00000519284 130 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.56□□□□□ -1.52
PRPF3O43395 AP001922.4-201ENST00000526967 290 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 AP001189.2-201ENST00000527320 189 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.56□□□□□ -1.52
PRPF3O43395 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 AC010198.2-201ENST00000550612 259 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.56□□□□□ -1.52
PRPF3O43395 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.56□□□□□ -1.52
PRPF3O43395 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.56□□□□□ -1.52
PRPF3O43395 MIR4512-201ENST00000583257 77 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF3O43395 AC005084.1-201ENST00000605160 304 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.56□□□□□ -1.52
PRPF3O43395 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF3O43395 AC026634.1-201ENST00000634369 198 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 AC114546.3-201ENST00000623582 1734 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PRPF3O43395 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PRPF3O43395 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF3O43395 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.55□□□□□ -1.52
PRPF3O43395 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.55□□□□□ -1.52
PRPF3O43395 AC005005.4-201ENST00000623789 16698 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF3O43395 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF3O43395 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF3O43395 AC000374.1-201ENST00000434698 1745 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.55□□□□□ -1.52
PRPF3O43395 RNA5SP191-201ENST00000362585 102 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 SUGT1P1-201ENST00000379514 476 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 TAF9BP1-201ENST00000396646 746 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 RNA5SP113-201ENST00000410486 84 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AC008280.1-201ENST00000418851 412 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 E2F6P2-201ENST00000420708 748 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 RPL34P6-201ENST00000432390 345 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF3O43395 B3GNT2P1-201ENST00000434960 952 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 RPL23AP15-201ENST00000450202 459 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AL133477.1-201ENST00000457472 514 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 RPS3AP41-201ENST00000462701 778 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 RN7SL610P-201ENST00000463845 291 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF3O43395 RPL30P11-201ENST00000495304 339 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.55□□□□□ -1.52
PRPF3O43395 SCARNA22-201ENST00000503991 125 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.55□□□□□ -1.52
PRPF3O43395 AC109445.1-201ENST00000512356 383 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AC138938.1-201ENST00000515431 782 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 FABP5P12-201ENST00000515543 389 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
PRPF3O43395 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PRPF3O43395 AC005832.3-201ENST00000537929 631 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AC133555.2-201ENST00000550213 292 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 PCNPP1-201ENST00000552501 511 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 FKBP1BP1-201ENST00000553366 325 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AC087477.6-201ENST00000559595 843 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF3O43395 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.55□□□□□ -1.52
PRPF3O43395 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF3O43395 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.55□□□□□ -1.52
PRPF3O43395 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.55□□□□□ -1.52
PRPF3O43395 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.55□□□□□ -1.52
PRPF3O43395 FAM27B-201ENST00000610601 213 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF3O43395 AP002791.1-201ENST00000623291 381 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 AP001642.1-201ENST00000624727 2117 ntBASIC5.55□□□□□ -1.52
PRPF3O43395 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF3O43395 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF3O43395 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PRPF3O43395 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF3O43395 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PRPF3O43395 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PRPF3O43395 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
PRPF3O43395 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PRPF3O43395 AC005539.1-201ENST00000443768 1479 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRPF3O43395 SNORD116.1-201ENST00000365628 92 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRPF3O43395 RNU6-444P-201ENST00000383988 108 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 SNORA68.2-201ENST00000391263 128 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AL161909.1-201ENST00000397390 712 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 ARL4AP5-201ENST00000404372 599 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC004074.1-201ENST00000421810 1063 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 OR2AH1P-201ENST00000425717 928 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 OR2B7P-201ENST00000429302 934 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 COX7BP2-201ENST00000437976 242 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC004938.1-201ENST00000438468 308 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF3O43395 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF3O43395 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF3O43395 AC063943.1-201ENST00000465434 453 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms