Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 Z97055.1-201ENST00000419730 712 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 RPL7P53-201ENST00000421245 739 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 AL691449.1-201ENST00000426570 421 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 HIGD1AP12-201ENST00000427832 281 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 MTND2P2-201ENST00000434633 945 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 NANOGP10-201ENST00000453325 895 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 RPL5P32-201ENST00000454085 879 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 RN7SL738P-201ENST00000470264 297 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 PPIAP15-201ENST00000479662 484 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 NDUFA5P2-201ENST00000519723 344 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 AC009643.1-201ENST00000532030 391 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 AL445567.2-201ENST00000618935 498 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 OR6C71P-202ENST00000641886 1107 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 AP000756.2-201ENST00000624168 2567 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC42Q96M95 CEP170P1-201ENST00000502249 4587 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 RNU6-1331P-201ENST00000363658 106 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 RNA5SP130-201ENST00000364431 114 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 OR6K4P-201ENST00000423179 955 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 SEC63P1-201ENST00000425785 1258 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 IFNWP4-201ENST00000453148 294 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 AL121576.1-201ENST00000556055 276 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 VN1R81P-201ENST00000602085 372 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 AC068790.4-201ENST00000602474 263 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 AC020910.2-201ENST00000603635 610 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 AC073530.2-201ENST00000623987 261 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CCDC42Q96M95 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC42Q96M95 CCT8P1-201ENST00000413611 1657 ntBASIC4.1□□□□□ -1.75
CCDC42Q96M95 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 OR6C69P-201ENST00000394268 893 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AL391417.1-201ENST00000404100 426 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC245028.1-201ENST00000423259 256 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 BRWD1P3-201ENST00000428816 390 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC022022.1-201ENST00000430304 178 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 NUTF2P3-201ENST00000448540 384 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC005229.2-201ENST00000456995 399 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 RPL7AP52-201ENST00000458096 790 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC110792.1-201ENST00000491826 472 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 RNA5SP208-201ENST00000516156 78 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC42Q96M95 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AL713998.2-201ENST00000604538 1198 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AL034351.1-201ENST00000605288 668 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC022960.2-201ENST00000616300 666 ntBASIC4.09□□□□□ -1.75
CCDC42Q96M95 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC42Q96M95 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC42Q96M95 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC42Q96M95 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
CCDC42Q96M95 AC009229.4-201ENST00000623854 1947 ntBASIC4.09□□□□□ -1.76
CCDC42Q96M95 EXOC5P1-201ENST00000510543 1969 ntBASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms