Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL031779.1-201ENST00000415663 330 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 MED14P1-201ENST00000430517 648 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 PPIAP13-201ENST00000434706 478 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 RPS25P9-201ENST00000435591 252 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 NDUFA12P1-201ENST00000455914 406 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 RN7SL443P-201ENST00000464331 290 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 MYL12BP2-201ENST00000503948 512 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 HMGB3P13-201ENST00000511263 607 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 NDUFA5P2-201ENST00000519723 344 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 MIR4660-201ENST00000583549 74 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AP001981.2-201ENST00000603241 418 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 TAS2R6P-201ENST00000605022 826 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AL121612.2-201ENST00000612261 482 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 MIR7155-201ENST00000615925 56 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 CDR1-202ENST00000625883 1485 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 RPL23P2-201ENST00000320371 421 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 SUGT1P1-201ENST00000379514 476 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 Y_RNA.505-201ENST00000384489 102 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 SNORD116-23-201ENST00000384645 92 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 MIR765-201ENST00000390226 114 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AL139098.1-201ENST00000407291 389 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 RNU2-65P-201ENST00000410162 185 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 RNU6-648P-201ENST00000410190 107 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC211486.3-201ENST00000412694 621 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 RPL23AP27-201ENST00000415161 451 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 Z99497.1-201ENST00000421282 135 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 BX323845.1-201ENST00000432417 179 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 PTMAP6-201ENST00000439110 327 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 MTND1P30-201ENST00000441241 901 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 TAF9P1-201ENST00000445421 515 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC108463.1-201ENST00000450258 347 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 TAF9P2-201ENST00000454958 515 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC005229.2-201ENST00000456995 399 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 CCDC75P1-201ENST00000469247 791 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC072039.1-201ENST00000477611 581 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC068724.1-201ENST00000487100 792 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 ARL4AP1-201ENST00000503220 705 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 NIFKP7-201ENST00000503365 834 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC112198.1-201ENST00000505369 1220 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 OR5M14P-201ENST00000506803 618 ntBASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTHRC1Q96CG8 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms