Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 SNORD11.1-201ENST00000459482 85 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC083982.1-201ENST00000485679 344 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC093752.1-206ENST00000511823 336 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 NDUFS5P6-201ENST00000529136 295 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC006518.2-201ENST00000542513 940 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC069240.1-201ENST00000548774 375 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 MTCYBP23-201ENST00000558717 1102 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC124068.1-201ENST00000563131 678 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 ZNF92P3-201ENST00000596594 954 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC090525.3-201ENST00000605601 189 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 SNX18P1Y-201ENST00000616231 511 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC109809.1-201ENST00000619665 545 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AP003497.2-201ENST00000624220 967 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 U6.107-201ENST00000637108 79 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AL137100.1-201ENST00000556703 1620 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 CPHL1P-201ENST00000461341 3407 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
SLC44A1Q8WWI5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 RNA5SP52-201ENST00000362448 134 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 RNU6-549P-201ENST00000384433 107 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 RNA5SP113-201ENST00000410486 84 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC004074.1-201ENST00000421810 1063 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC073335.1-201ENST00000427776 363 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 HMGB3P5-201ENST00000428894 612 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AL049745.1-201ENST00000433953 286 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 ELOCP11-201ENST00000436690 332 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 OR10R1P-201ENST00000441524 1141 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AL357520.1-201ENST00000441557 453 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC011753.3-201ENST00000443436 406 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AL592437.1-201ENST00000443781 492 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 ELOCP16-201ENST00000444494 332 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC099063.2-201ENST00000446360 662 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 EIF2S2P2-201ENST00000447161 982 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AL354710.1-201ENST00000453641 246 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC006967.1-201ENST00000467608 589 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 RPL7P16-201ENST00000479738 738 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 RPS3AP6-201ENST00000484430 795 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 RPL21P131-201ENST00000497298 483 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC105233.1-201ENST00000498840 781 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC008837.1-201ENST00000511513 412 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 OR10V3P-201ENST00000525712 725 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 LRRC6P1-201ENST00000532188 885 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 POLR2KP1-201ENST00000553226 168 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 BGLT3-201ENST00000564523 994 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC073091.2-201ENST00000603205 907 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC106052.1-201ENST00000608029 497 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC013468.1-201ENST00000608680 598 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AL136295.6-201ENST00000610486 658 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 PART1_2.1-201ENST00000612397 250 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC087385.3-201ENST00000620477 187 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC007546.2-201ENST00000623996 360 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms