Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC019278.1-201ENST00000623516 479 ntBASIC3.3□□□□□ -1.88
LRRK2Q5S007 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRK2Q5S007 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.3□□□□□ -1.88
LRRK2Q5S007 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRK2Q5S007 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRK2Q5S007 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
LRRK2Q5S007 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRK2Q5S007 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRK2Q5S007 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRK2Q5S007 RN7SKP222-201ENST00000410651 315 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 SRIP2-201ENST00000428470 166 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 ATP5JP1-201ENST00000431631 322 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC103783.1-201ENST00000520506 373 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 ATP5A1P2-202ENST00000616464 443 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 AL512643.1-201ENST00000635735 524 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRK2Q5S007 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRK2Q5S007 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRK2Q5S007 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC010740.1-201ENST00000417035 684 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC009506.2-201ENST00000420635 840 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 COTL1P1-201ENST00000422309 375 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC006116.10-201ENST00000591836 581 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC103881.1-201ENST00000603476 538 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC093732.2-201ENST00000607950 274 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC026368.1-201ENST00000614934 690 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 AC079684.1-201ENST00000621405 437 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRK2Q5S007 OTUD4P1-201ENST00000237841 3067 ntBASIC3.29□□□□□ -1.88
LRRK2Q5S007 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 RPL7AP73-201ENST00000413490 353 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 AC006511.1-201ENST00000470614 315 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 RPL23AP87-202ENST00000573039 466 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 AC083843.3-201ENST00000623679 2186 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 AP001273.1-201ENST00000624493 3152 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 SNORD96B-201ENST00000386148 79 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 OR1AA1P-201ENST00000419597 916 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 VN1R48P-201ENST00000448149 1036 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRK2Q5S007 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 AC011611.1-201ENST00000552179 197 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 MIR432-201ENST00000606207 94 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 AL353726.1-201ENST00000614041 1000 ntBASIC3.28□□□□□ -1.88
LRRK2Q5S007 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRK2Q5S007 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
LRRK2Q5S007 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.28□□□□□ -1.89
LRRK2Q5S007 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.28□□□□□ -1.89
LRRK2Q5S007 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRK2Q5S007 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRK2Q5S007 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.27□□□□□ -1.89
LRRK2Q5S007 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LRRK2Q5S007 RN7SKP186-201ENST00000365371 303 ntBASIC3.27□□□□□ -1.89
LRRK2Q5S007 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
LRRK2Q5S007 MIR199A2-201ENST00000385289 110 ntBASIC3.27□□□□□ -1.89
LRRK2Q5S007 U3.19-201ENST00000390893 196 ntBASIC3.27□□□□□ -1.89
LRRK2Q5S007 MIR1911-201ENST00000410783 80 ntBASIC3.27□□□□□ -1.89
LRRK2Q5S007 RNA5SP247-201ENST00000411181 105 ntBASIC3.27□□□□□ -1.89
LRRK2Q5S007 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.27□□□□□ -1.89
LRRK2Q5S007 EIF4A1P1-201ENST00000420241 934 ntBASIC3.27□□□□□ -1.89
LRRK2Q5S007 CCRL1P1-201ENST00000449542 1053 ntBASIC3.27□□□□□ -1.89
LRRK2Q5S007 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms