Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 COX6CP15-201ENST00000426313 211 ntBASIC4.62□□□□□ -1.67
VCPP55072 RWDD4P2-201ENST00000426392 563 ntBASIC4.62□□□□□ -1.67
VCPP55072 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.62□□□□□ -1.67
VCPP55072 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
VCPP55072 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.62□□□□□ -1.67
VCPP55072 FTH1P25-201ENST00000447665 469 ntBASIC4.62□□□□□ -1.67
VCPP55072 AC012671.1-201ENST00000451912 203 ntBASIC4.62□□□□□ -1.67
VCPP55072 VN1R32P-201ENST00000452234 905 ntBASIC4.62□□□□□ -1.67
VCPP55072 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 AC010469.1-201ENST00000463864 576 ntBASIC4.62□□□□□ -1.67
VCPP55072 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.62□□□□□ -1.67
VCPP55072 AC104629.2-201ENST00000468627 598 ntBASIC4.62□□□□□ -1.67
VCPP55072 RPS26P28-201ENST00000470806 348 ntBASIC4.62□□□□□ -1.67
VCPP55072 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
VCPP55072 RWDD4P1-201ENST00000488019 565 ntBASIC4.62□□□□□ -1.67
VCPP55072 AC098799.1-201ENST00000504752 800 ntBASIC4.62□□□□□ -1.67
VCPP55072 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.62□□□□□ -1.67
VCPP55072 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.62□□□□□ -1.67
VCPP55072 OR5BC1P-201ENST00000529327 739 ntBASIC4.62□□□□□ -1.67
VCPP55072 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VCPP55072 AC093014.1-201ENST00000548926 724 ntBASIC4.62□□□□□ -1.67
VCPP55072 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.62□□□□□ -1.67
VCPP55072 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
VCPP55072 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.62□□□□□ -1.67
VCPP55072 MIR3200-201ENST00000580767 85 ntBASIC4.62□□□□□ -1.67
VCPP55072 AL160290.3-201ENST00000604869 165 ntBASIC4.62□□□□□ -1.67
VCPP55072 HMGB1P51-201ENST00000605166 638 ntBASIC4.62□□□□□ -1.67
VCPP55072 AC084036.1-201ENST00000609190 508 ntBASIC4.62□□□□□ -1.67
VCPP55072 AC009032.1-201ENST00000617574 431 ntBASIC4.62□□□□□ -1.67
VCPP55072 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.62□□□□□ -1.67
VCPP55072 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VCPP55072 AC012442.3-202ENST00000636742 206 ntBASIC4.62□□□□□ -1.67
VCPP55072 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VCPP55072 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 KPNA2P2-201ENST00000419546 1489 ntBASIC4.62□□□□□ -1.67
VCPP55072 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.62□□□□□ -1.67
VCPP55072 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VCPP55072 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 AL133243.3-201ENST00000617415 3004 ntBASIC4.62□□□□□ -1.67
VCPP55072 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.61□□□□□ -1.67
VCPP55072 EIF2AP4-201ENST00000424793 1781 ntBASIC4.61□□□□□ -1.67
VCPP55072 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VCPP55072 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VCPP55072 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
VCPP55072 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.61□□□□□ -1.67
VCPP55072 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.61□□□□□ -1.67
VCPP55072 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.61□□□□□ -1.67
VCPP55072 OR8G2P-201ENST00000412796 908 ntBASIC4.61□□□□□ -1.67
VCPP55072 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.61□□□□□ -1.67
VCPP55072 RSL24D1P8-201ENST00000434442 492 ntBASIC4.61□□□□□ -1.67
VCPP55072 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.61□□□□□ -1.67
VCPP55072 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.61□□□□□ -1.67
VCPP55072 NDUFS5P3-201ENST00000450668 321 ntBASIC4.61□□□□□ -1.67
VCPP55072 AC005229.2-201ENST00000456995 399 ntBASIC4.61□□□□□ -1.67
VCPP55072 MTND6P6-201ENST00000478031 263 ntBASIC4.61□□□□□ -1.67
VCPP55072 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.61□□□□□ -1.67
VCPP55072 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.61□□□□□ -1.67
VCPP55072 SNORA74D-201ENST00000516404 141 ntBASIC4.61□□□□□ -1.67
VCPP55072 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.61□□□□□ -1.67
VCPP55072 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.61□□□□□ -1.67
VCPP55072 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.61□□□□□ -1.67
VCPP55072 AC053481.4-201ENST00000583164 216 ntBASIC4.61□□□□□ -1.67
VCPP55072 AC110743.1-201ENST00000584870 478 ntBASIC4.61□□□□□ -1.67
VCPP55072 Z98200.1-201ENST00000607298 470 ntBASIC4.61□□□□□ -1.67
VCPP55072 AC015813.4-201ENST00000610469 179 ntBASIC4.61□□□□□ -1.67
VCPP55072 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.61□□□□□ -1.67
VCPP55072 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
VCPP55072 AC099669.2-201ENST00000616549 437 ntBASIC4.61□□□□□ -1.67
VCPP55072 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
VCPP55072 MIR8059-201ENST00000620427 81 ntBASIC4.61□□□□□ -1.67
VCPP55072 AC006065.6-201ENST00000625201 545 ntBASIC4.61□□□□□ -1.67
VCPP55072 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.61□□□□□ -1.67
VCPP55072 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.61□□□□□ -1.67
VCPP55072 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VCPP55072 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VCPP55072 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VCPP55072 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VCPP55072 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
VCPP55072 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
VCPP55072 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VCPP55072 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.6□□□□□ -1.67
VCPP55072 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.6□□□□□ -1.67
VCPP55072 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VCPP55072 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VCPP55072 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VCPP55072 OR5P1P-201ENST00000299512 925 ntBASIC4.6□□□□□ -1.67
VCPP55072 RNU6-532P-201ENST00000384318 107 ntBASIC4.6□□□□□ -1.67
VCPP55072 MIR320B1-201ENST00000390209 79 ntBASIC4.6□□□□□ -1.67
VCPP55072 AL161909.1-201ENST00000397390 712 ntBASIC4.6□□□□□ -1.67
VCPP55072 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.6□□□□□ -1.67
VCPP55072 AL445528.1-201ENST00000426330 420 ntBASIC4.6□□□□□ -1.67
VCPP55072 AC073335.1-201ENST00000427776 363 ntBASIC4.6□□□□□ -1.67
VCPP55072 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.6□□□□□ -1.67
VCPP55072 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.6□□□□□ -1.67
VCPP55072 RPS3AP12-201ENST00000443616 753 ntBASIC4.6□□□□□ -1.67
VCPP55072 AL133547.1-201ENST00000448546 220 ntBASIC4.6□□□□□ -1.67
VCPP55072 MTND2P3-201ENST00000452458 470 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms