Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.92□□□□□ -1.46
MRE11P49959 MRPL42P4-201ENST00000453267 443 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.92□□□□□ -1.46
MRE11P49959 RPL5P13-201ENST00000462840 709 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC022215.1-201ENST00000481770 362 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC107398.1-201ENST00000486904 505 ntBASIC5.92□□□□□ -1.46
MRE11P49959 DEFB109F-201ENST00000491870 277 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC008897.1-201ENST00000494006 347 ntBASIC5.92□□□□□ -1.46
MRE11P49959 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 AC022880.1-201ENST00000534017 973 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC005868.1-201ENST00000536421 331 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC010198.2-201ENST00000550612 259 ntBASIC5.92□□□□□ -1.46
MRE11P49959 NBEAP1-201ENST00000554452 979 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 BNIP3P5-201ENST00000562290 498 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.92□□□□□ -1.46
MRE11P49959 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 AC209154.1-201ENST00000582156 337 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.92□□□□□ -1.46
MRE11P49959 NTAN1P1-201ENST00000603150 646 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC010738.1-201ENST00000604970 987 ntBASIC5.92□□□□□ -1.46
MRE11P49959 MIR92B-201ENST00000607575 96 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AL122125.1-201ENST00000616999 600 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 AL353662.3-201ENST00000625131 237 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC090582.1-201ENST00000636321 199 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.92□□□□□ -1.46
MRE11P49959 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 KARSP3-201ENST00000571212 1504 ntBASIC5.92□□□□□ -1.46
MRE11P49959 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
MRE11P49959 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 MTND5P29-201ENST00000458676 1807 ntBASIC5.92□□□□□ -1.46
MRE11P49959 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 SCARNA15-201ENST00000607520 4325 ntBASIC5.92□□□□□ -1.46
MRE11P49959 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 AC111188.2-201ENST00000529697 1387 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC025263.3-201ENST00000622965 1396 ntBASIC5.92□□□□□ -1.46
MRE11P49959 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
MRE11P49959 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MRE11P49959 AL672167.1-205ENST00000641112 3080 ntBASIC5.91□□□□□ -1.46
MRE11P49959 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MRE11P49959 LINC01355-201ENST00000566551 5444 ntBASIC5.91□□□□□ -1.46
MRE11P49959 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
MRE11P49959 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.91□□□□□ -1.46
MRE11P49959 RNA5SP479-201ENST00000364858 117 ntBASIC5.91□□□□□ -1.46
MRE11P49959 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
MRE11P49959 RNU6-157P-201ENST00000383957 107 ntBASIC5.91□□□□□ -1.46
MRE11P49959 Y_RNA.559-201ENST00000384686 107 ntBASIC5.91□□□□□ -1.46
MRE11P49959 SNORA40.2-201ENST00000390847 128 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AF274854.1-201ENST00000413236 615 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AL035458.1-201ENST00000433096 585 ntBASIC5.91□□□□□ -1.46
MRE11P49959 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.91□□□□□ -1.46
MRE11P49959 AC011753.3-201ENST00000443436 406 ntBASIC5.91□□□□□ -1.46
MRE11P49959 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.91□□□□□ -1.46
MRE11P49959 AC007327.1-201ENST00000447461 264 ntBASIC5.91□□□□□ -1.46
MRE11P49959 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.91□□□□□ -1.46
MRE11P49959 NDUFA12P1-201ENST00000455914 406 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.91□□□□□ -1.46
MRE11P49959 AC079168.1-201ENST00000458741 345 ntBASIC5.91□□□□□ -1.46
MRE11P49959 RN7SL189P-201ENST00000468631 289 ntBASIC5.91□□□□□ -1.46
MRE11P49959 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
MRE11P49959 LINC00888-204ENST00000487386 421 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MRE11P49959 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.91□□□□□ -1.46
MRE11P49959 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.91□□□□□ -1.46
MRE11P49959 AC113347.3-201ENST00000509113 148 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AC116353.3-201ENST00000511215 249 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.91□□□□□ -1.46
MRE11P49959 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.91□□□□□ -1.46
MRE11P49959 MTCO3P15-201ENST00000526563 574 ntBASIC5.91□□□□□ -1.46
MRE11P49959 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.91□□□□□ -1.46
MRE11P49959 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.91□□□□□ -1.46
MRE11P49959 ACTR3BP3-201ENST00000565577 979 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AC010546.1-201ENST00000569391 485 ntBASIC5.91□□□□□ -1.46
MRE11P49959 CYCSP40-201ENST00000575927 294 ntBASIC5.91□□□□□ -1.46
MRE11P49959 MIR4675-201ENST00000577898 77 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.91□□□□□ -1.46
MRE11P49959 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.91□□□□□ -1.46
MRE11P49959 VN1R90P-201ENST00000595717 726 ntBASIC5.91□□□□□ -1.46
MRE11P49959 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.91□□□□□ -1.46
MRE11P49959 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AC233280.2-201ENST00000603917 1070 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AL021997.1-201ENST00000605757 193 ntBASIC5.91□□□□□ -1.46
MRE11P49959 RN7SKP299-201ENST00000606679 301 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AP000254.1-201ENST00000609934 520 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AL121890.2-201ENST00000617644 465 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AC139769.3-201ENST00000618383 175 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AP002505.2-201ENST00000623585 696 ntBASIC5.91□□□□□ -1.46
MRE11P49959 AP003072.4-201ENST00000624580 310 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms