Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC022387.2-201ENST00000604050 448 ntBASIC4.07□□□□□ -1.76
RORAP35398 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.07□□□□□ -1.76
RORAP35398 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RORAP35398 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.06□□□□□ -1.76
RORAP35398 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RORAP35398 MTCO1P8-201ENST00000416914 1523 ntBASIC4.06□□□□□ -1.76
RORAP35398 AC100871.1-201ENST00000507871 1456 ntBASIC4.06□□□□□ -1.76
RORAP35398 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.06□□□□□ -1.76
RORAP35398 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RORAP35398 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.06□□□□□ -1.76
RORAP35398 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 RNA5SP36-201ENST00000410197 133 ntBASIC4.06□□□□□ -1.76
RORAP35398 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.06□□□□□ -1.76
RORAP35398 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.06□□□□□ -1.76
RORAP35398 RPL7P28-201ENST00000437739 740 ntBASIC4.06□□□□□ -1.76
RORAP35398 EEF1A1P1-201ENST00000447052 739 ntBASIC4.06□□□□□ -1.76
RORAP35398 RPL23AP81-201ENST00000455252 467 ntBASIC4.06□□□□□ -1.76
RORAP35398 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.06□□□□□ -1.76
RORAP35398 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
RORAP35398 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 IGLVIV-53-201ENST00000520107 367 ntBASIC4.06□□□□□ -1.76
RORAP35398 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.06□□□□□ -1.76
RORAP35398 AL352979.3-201ENST00000553515 247 ntBASIC4.06□□□□□ -1.76
RORAP35398 RN7SL600P-201ENST00000581811 299 ntBASIC4.06□□□□□ -1.76
RORAP35398 VN1R85P-201ENST00000601587 426 ntBASIC4.06□□□□□ -1.76
RORAP35398 AL020997.2-201ENST00000602607 184 ntBASIC4.06□□□□□ -1.76
RORAP35398 ABI1P1-201ENST00000603375 1120 ntBASIC4.06□□□□□ -1.76
RORAP35398 AC024941.1-201ENST00000612250 334 ntBASIC4.06□□□□□ -1.76
RORAP35398 AL353726.1-201ENST00000614041 1000 ntBASIC4.06□□□□□ -1.76
RORAP35398 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 RPL23AP61-201ENST00000623642 466 ntBASIC4.06□□□□□ -1.76
RORAP35398 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.06□□□□□ -1.76
RORAP35398 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.06□□□□□ -1.76
RORAP35398 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.06□□□□□ -1.76
RORAP35398 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RORAP35398 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RORAP35398 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RORAP35398 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.05□□□□□ -1.76
RORAP35398 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 AL139811.1-201ENST00000424779 2299 ntBASIC4.05□□□□□ -1.76
RORAP35398 RNU6-666P-201ENST00000363499 107 ntBASIC4.05□□□□□ -1.76
RORAP35398 SNORA62.2-201ENST00000364672 152 ntBASIC4.05□□□□□ -1.76
RORAP35398 MIR3074-201ENST00000384885 81 ntBASIC4.05□□□□□ -1.76
RORAP35398 RN7SKP177-201ENST00000410567 355 ntBASIC4.05□□□□□ -1.76
RORAP35398 RPL17P36-201ENST00000420302 549 ntBASIC4.05□□□□□ -1.76
RORAP35398 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 AC007563.3-201ENST00000433233 371 ntBASIC4.05□□□□□ -1.76
RORAP35398 AL606490.8-201ENST00000441624 319 ntBASIC4.05□□□□□ -1.76
RORAP35398 HSFY6P-201ENST00000445573 403 ntBASIC4.05□□□□□ -1.76
RORAP35398 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.05□□□□□ -1.76
RORAP35398 RPL23AP12-201ENST00000467573 473 ntBASIC4.05□□□□□ -1.76
RORAP35398 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
RORAP35398 SYT14P1-201ENST00000481459 721 ntBASIC4.05□□□□□ -1.76
RORAP35398 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.05□□□□□ -1.76
RORAP35398 KCTD9P2-201ENST00000512203 1013 ntBASIC4.05□□□□□ -1.76
RORAP35398 AC034244.2-201ENST00000514668 858 ntBASIC4.05□□□□□ -1.76
RORAP35398 AC099522.1-202ENST00000514718 367 ntBASIC4.05□□□□□ -1.76
RORAP35398 AL161713.1-201ENST00000555538 145 ntBASIC4.05□□□□□ -1.76
RORAP35398 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
RORAP35398 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RORAP35398 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.05□□□□□ -1.76
RORAP35398 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.05□□□□□ -1.76
RORAP35398 AC068020.1-201ENST00000594215 661 ntBASIC4.05□□□□□ -1.76
RORAP35398 AC005034.4-201ENST00000603612 899 ntBASIC4.05□□□□□ -1.76
RORAP35398 AL138721.1-201ENST00000616756 179 ntBASIC4.05□□□□□ -1.76
RORAP35398 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.05□□□□□ -1.76
RORAP35398 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
RORAP35398 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.05□□□□□ -1.76
RORAP35398 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RORAP35398 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.05□□□□□ -1.76
RORAP35398 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RORAP35398 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.04□□□□□ -1.76
RORAP35398 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.04□□□□□ -1.76
RORAP35398 IQCB2P-201ENST00000401788 1633 ntBASIC4.04□□□□□ -1.76
RORAP35398 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.04□□□□□ -1.76
RORAP35398 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 RN7SKP33-201ENST00000410942 340 ntBASIC4.04□□□□□ -1.76
RORAP35398 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.04□□□□□ -1.76
RORAP35398 BTF3P9-201ENST00000418784 283 ntBASIC4.04□□□□□ -1.76
RORAP35398 RPL30P3-201ENST00000424262 333 ntBASIC4.04□□□□□ -1.76
RORAP35398 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 COX6B1P7-201ENST00000430845 235 ntBASIC4.04□□□□□ -1.76
RORAP35398 CEACAMP1-201ENST00000434624 1035 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms